Protein–RNA interactions for Protein: Q9UN66

PCDHB8, Protocadherin beta-8, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB8Q9UN66 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHB8Q9UN66 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
PCDHB8Q9UN66 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHB8Q9UN66 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
PCDHB8Q9UN66 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
PCDHB8Q9UN66 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC22.39■■□□□ 1.18
PCDHB8Q9UN66 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHB8Q9UN66 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHB8Q9UN66 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHB8Q9UN66 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHB8Q9UN66 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHB8Q9UN66 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHB8Q9UN66 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHB8Q9UN66 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC22.39■■□□□ 1.17
PCDHB8Q9UN66 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC22.39■■□□□ 1.17
PCDHB8Q9UN66 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHB8Q9UN66 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHB8Q9UN66 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHB8Q9UN66 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHB8Q9UN66 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHB8Q9UN66 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHB8Q9UN66 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHB8Q9UN66 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHB8Q9UN66 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC22.38■■□□□ 1.17
PCDHB8Q9UN66 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
PCDHB8Q9UN66 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHB8Q9UN66 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHB8Q9UN66 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHB8Q9UN66 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC22.38■■□□□ 1.17
PCDHB8Q9UN66 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC22.38■■□□□ 1.17
PCDHB8Q9UN66 AL138781.1-201ENST00000566567 1274 ntBASIC22.38■■□□□ 1.17
PCDHB8Q9UN66 AL162412.1-201ENST00000567129 965 ntBASIC22.38■■□□□ 1.17
PCDHB8Q9UN66 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC22.38■■□□□ 1.17
PCDHB8Q9UN66 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC22.38■■□□□ 1.17
PCDHB8Q9UN66 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHB8Q9UN66 AC069236.1-201ENST00000604339 616 ntBASIC22.38■■□□□ 1.17
PCDHB8Q9UN66 AL591742.1-201ENST00000604433 565 ntBASIC22.38■■□□□ 1.17
PCDHB8Q9UN66 PFKL-212ENST00000628044 129 ntTSL 3 BASIC22.38■■□□□ 1.17
PCDHB8Q9UN66 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC22.38■■□□□ 1.17
PCDHB8Q9UN66 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHB8Q9UN66 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHB8Q9UN66 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHB8Q9UN66 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHB8Q9UN66 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHB8Q9UN66 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC22.37■■□□□ 1.17
PCDHB8Q9UN66 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHB8Q9UN66 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC22.37■■□□□ 1.17
PCDHB8Q9UN66 AC008694.1-202ENST00000636953 945 ntBASIC22.37■■□□□ 1.17
PCDHB8Q9UN66 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHB8Q9UN66 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC22.37■■□□□ 1.17
PCDHB8Q9UN66 NARF-205ENST00000412079 1760 ntTSL 5 BASIC22.37■■□□□ 1.17
PCDHB8Q9UN66 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC22.37■■□□□ 1.17
PCDHB8Q9UN66 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHB8Q9UN66 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHB8Q9UN66 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHB8Q9UN66 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHB8Q9UN66 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHB8Q9UN66 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHB8Q9UN66 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHB8Q9UN66 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
PCDHB8Q9UN66 CD44-222ENST00000526025 1052 ntTSL 2 BASIC22.36■■□□□ 1.17
PCDHB8Q9UN66 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC22.36■■□□□ 1.17
PCDHB8Q9UN66 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC22.36■■□□□ 1.17
PCDHB8Q9UN66 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC22.36■■□□□ 1.17
PCDHB8Q9UN66 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC22.36■■□□□ 1.17
PCDHB8Q9UN66 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC22.36■■□□□ 1.17
PCDHB8Q9UN66 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHB8Q9UN66 C11orf96-202ENST00000528572 1834 ntBASIC22.36■■□□□ 1.17
PCDHB8Q9UN66 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHB8Q9UN66 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHB8Q9UN66 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC22.35■■□□□ 1.17
PCDHB8Q9UN66 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC22.35■■□□□ 1.17
PCDHB8Q9UN66 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHB8Q9UN66 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHB8Q9UN66 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
PCDHB8Q9UN66 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC22.35■■□□□ 1.17
PCDHB8Q9UN66 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHB8Q9UN66 APTR-205ENST00000447009 902 ntTSL 2 BASIC22.35■■□□□ 1.17
PCDHB8Q9UN66 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHB8Q9UN66 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC22.35■■□□□ 1.17
PCDHB8Q9UN66 AC016405.3-201ENST00000607710 860 ntBASIC22.35■■□□□ 1.17
PCDHB8Q9UN66 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC22.35■■□□□ 1.17
PCDHB8Q9UN66 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHB8Q9UN66 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHB8Q9UN66 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHB8Q9UN66 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC22.34■■□□□ 1.17
PCDHB8Q9UN66 ECEL1P1-201ENST00000373592 1742 ntBASIC22.34■■□□□ 1.17
PCDHB8Q9UN66 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC22.34■■□□□ 1.17
PCDHB8Q9UN66 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHB8Q9UN66 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHB8Q9UN66 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHB8Q9UN66 AL512625.2-201ENST00000417533 625 ntBASIC22.34■■□□□ 1.17
PCDHB8Q9UN66 AC093787.1-201ENST00000450396 207 ntBASIC22.34■■□□□ 1.17
PCDHB8Q9UN66 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC22.34■■□□□ 1.17
PCDHB8Q9UN66 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC22.34■■□□□ 1.17
PCDHB8Q9UN66 MARS-234ENST00000630571 216 ntTSL 5 BASIC22.34■■□□□ 1.17
PCDHB8Q9UN66 MARS-235ENST00000630803 183 ntTSL 3 BASIC22.34■■□□□ 1.17
PCDHB8Q9UN66 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHB8Q9UN66 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHB8Q9UN66 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms