Protein–RNA interactions for Protein: Q9UJJ7

RPUSD1, RNA pseudouridylate synthase domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1Q9UJJ7 CLDN5-201ENST00000403084 2357 ntBASIC17.46■□□□□ 0.39
RPUSD1Q9UJJ7 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPUSD1Q9UJJ7 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPUSD1Q9UJJ7 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
RPUSD1Q9UJJ7 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPUSD1Q9UJJ7 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.46■□□□□ 0.39
RPUSD1Q9UJJ7 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
RPUSD1Q9UJJ7 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.46■□□□□ 0.39
RPUSD1Q9UJJ7 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPUSD1Q9UJJ7 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPUSD1Q9UJJ7 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPUSD1Q9UJJ7 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RPUSD1Q9UJJ7 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.46■□□□□ 0.39
RPUSD1Q9UJJ7 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.45■□□□□ 0.38
RPUSD1Q9UJJ7 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPUSD1Q9UJJ7 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPUSD1Q9UJJ7 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.45■□□□□ 0.38
RPUSD1Q9UJJ7 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.45■□□□□ 0.38
RPUSD1Q9UJJ7 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
RPUSD1Q9UJJ7 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RPUSD1Q9UJJ7 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RPUSD1Q9UJJ7 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.45■□□□□ 0.38
RPUSD1Q9UJJ7 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.45■□□□□ 0.38
RPUSD1Q9UJJ7 KRT18P20-201ENST00000548986 1279 ntBASIC17.45■□□□□ 0.38
RPUSD1Q9UJJ7 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.45■□□□□ 0.38
RPUSD1Q9UJJ7 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.45■□□□□ 0.38
RPUSD1Q9UJJ7 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPUSD1Q9UJJ7 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RPUSD1Q9UJJ7 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.45■□□□□ 0.38
RPUSD1Q9UJJ7 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.45■□□□□ 0.38
RPUSD1Q9UJJ7 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPUSD1Q9UJJ7 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPUSD1Q9UJJ7 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPUSD1Q9UJJ7 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.44■□□□□ 0.38
RPUSD1Q9UJJ7 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RPUSD1Q9UJJ7 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC17.44■□□□□ 0.38
RPUSD1Q9UJJ7 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPUSD1Q9UJJ7 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPUSD1Q9UJJ7 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPUSD1Q9UJJ7 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPUSD1Q9UJJ7 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPUSD1Q9UJJ7 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RPUSD1Q9UJJ7 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.44■□□□□ 0.38
RPUSD1Q9UJJ7 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RPUSD1Q9UJJ7 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RPUSD1Q9UJJ7 AC004911.1-201ENST00000416316 871 ntBASIC17.44■□□□□ 0.38
RPUSD1Q9UJJ7 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.44■□□□□ 0.38
RPUSD1Q9UJJ7 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RPUSD1Q9UJJ7 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RPUSD1Q9UJJ7 AC008175.2-201ENST00000612840 297 ntBASIC17.44■□□□□ 0.38
RPUSD1Q9UJJ7 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.44■□□□□ 0.38
RPUSD1Q9UJJ7 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPUSD1Q9UJJ7 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.44■□□□□ 0.38
RPUSD1Q9UJJ7 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPUSD1Q9UJJ7 Z98882.1-201ENST00000622160 2253 ntBASIC17.44■□□□□ 0.38
RPUSD1Q9UJJ7 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RPUSD1Q9UJJ7 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RPUSD1Q9UJJ7 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RPUSD1Q9UJJ7 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.43■□□□□ 0.38
RPUSD1Q9UJJ7 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.43■□□□□ 0.38
RPUSD1Q9UJJ7 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RPUSD1Q9UJJ7 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
RPUSD1Q9UJJ7 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RPUSD1Q9UJJ7 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC17.43■□□□□ 0.38
RPUSD1Q9UJJ7 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
RPUSD1Q9UJJ7 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RPUSD1Q9UJJ7 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RPUSD1Q9UJJ7 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RPUSD1Q9UJJ7 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.43■□□□□ 0.38
RPUSD1Q9UJJ7 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RPUSD1Q9UJJ7 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RPUSD1Q9UJJ7 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RPUSD1Q9UJJ7 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RPUSD1Q9UJJ7 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RPUSD1Q9UJJ7 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.43■□□□□ 0.38
RPUSD1Q9UJJ7 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.43■□□□□ 0.38
RPUSD1Q9UJJ7 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.43■□□□□ 0.38
RPUSD1Q9UJJ7 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.43■□□□□ 0.38
RPUSD1Q9UJJ7 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RPUSD1Q9UJJ7 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RPUSD1Q9UJJ7 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RPUSD1Q9UJJ7 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RPUSD1Q9UJJ7 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RPUSD1Q9UJJ7 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RPUSD1Q9UJJ7 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPUSD1Q9UJJ7 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPUSD1Q9UJJ7 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.42■□□□□ 0.38
RPUSD1Q9UJJ7 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.42■□□□□ 0.38
RPUSD1Q9UJJ7 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPUSD1Q9UJJ7 POU5F1P4-201ENST00000413175 1085 ntBASIC17.42■□□□□ 0.38
RPUSD1Q9UJJ7 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.42■□□□□ 0.38
RPUSD1Q9UJJ7 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RPUSD1Q9UJJ7 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RPUSD1Q9UJJ7 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RPUSD1Q9UJJ7 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.42■□□□□ 0.38
RPUSD1Q9UJJ7 UBE2DNL-204ENST00000602536 740 ntBASIC17.42■□□□□ 0.38
RPUSD1Q9UJJ7 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.42■□□□□ 0.38
RPUSD1Q9UJJ7 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.42■□□□□ 0.38
RPUSD1Q9UJJ7 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPUSD1Q9UJJ7 AC007375.3-201ENST00000600936 2314 ntBASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms