Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
COMMD3Q9UBI1 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.46■□□□□ 0.55
COMMD3Q9UBI1 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.46■□□□□ 0.55
COMMD3Q9UBI1 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COMMD3Q9UBI1 OR7E47P-201ENST00000546390 1422 ntBASIC18.46■□□□□ 0.55
COMMD3Q9UBI1 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
COMMD3Q9UBI1 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
COMMD3Q9UBI1 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COMMD3Q9UBI1 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COMMD3Q9UBI1 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
COMMD3Q9UBI1 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COMMD3Q9UBI1 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COMMD3Q9UBI1 AL020996.1-203ENST00000536896 2307 ntBASIC18.45■□□□□ 0.54
COMMD3Q9UBI1 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
COMMD3Q9UBI1 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.45■□□□□ 0.54
COMMD3Q9UBI1 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.45■□□□□ 0.54
COMMD3Q9UBI1 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COMMD3Q9UBI1 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
COMMD3Q9UBI1 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COMMD3Q9UBI1 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
COMMD3Q9UBI1 DUX4L18-201ENST00000553347 1267 ntBASIC18.45■□□□□ 0.54
COMMD3Q9UBI1 MIR4449-201ENST00000578365 66 ntBASIC18.45■□□□□ 0.54
COMMD3Q9UBI1 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC18.45■□□□□ 0.54
COMMD3Q9UBI1 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COMMD3Q9UBI1 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COMMD3Q9UBI1 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.45■□□□□ 0.54
COMMD3Q9UBI1 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
COMMD3Q9UBI1 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COMMD3Q9UBI1 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COMMD3Q9UBI1 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COMMD3Q9UBI1 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COMMD3Q9UBI1 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COMMD3Q9UBI1 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
COMMD3Q9UBI1 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
COMMD3Q9UBI1 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
COMMD3Q9UBI1 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COMMD3Q9UBI1 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.44■□□□□ 0.54
COMMD3Q9UBI1 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COMMD3Q9UBI1 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COMMD3Q9UBI1 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.44■□□□□ 0.54
COMMD3Q9UBI1 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
COMMD3Q9UBI1 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COMMD3Q9UBI1 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
COMMD3Q9UBI1 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.43■□□□□ 0.54
COMMD3Q9UBI1 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COMMD3Q9UBI1 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COMMD3Q9UBI1 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COMMD3Q9UBI1 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
COMMD3Q9UBI1 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.43■□□□□ 0.54
COMMD3Q9UBI1 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.43■□□□□ 0.54
COMMD3Q9UBI1 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.43■□□□□ 0.54
COMMD3Q9UBI1 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
COMMD3Q9UBI1 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
COMMD3Q9UBI1 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
COMMD3Q9UBI1 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC18.43■□□□□ 0.54
COMMD3Q9UBI1 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
COMMD3Q9UBI1 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC18.43■□□□□ 0.54
COMMD3Q9UBI1 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.43■□□□□ 0.54
COMMD3Q9UBI1 BHLHE23-202ENST00000612929 1109 ntBASIC18.43■□□□□ 0.54
COMMD3Q9UBI1 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
COMMD3Q9UBI1 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COMMD3Q9UBI1 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
COMMD3Q9UBI1 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COMMD3Q9UBI1 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COMMD3Q9UBI1 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COMMD3Q9UBI1 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COMMD3Q9UBI1 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
COMMD3Q9UBI1 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.43■□□□□ 0.54
COMMD3Q9UBI1 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COMMD3Q9UBI1 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.42■□□□□ 0.54
COMMD3Q9UBI1 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COMMD3Q9UBI1 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.42■□□□□ 0.54
COMMD3Q9UBI1 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COMMD3Q9UBI1 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COMMD3Q9UBI1 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
COMMD3Q9UBI1 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
COMMD3Q9UBI1 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
COMMD3Q9UBI1 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.42■□□□□ 0.54
COMMD3Q9UBI1 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.42■□□□□ 0.54
COMMD3Q9UBI1 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
COMMD3Q9UBI1 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.42■□□□□ 0.54
COMMD3Q9UBI1 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
COMMD3Q9UBI1 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.42■□□□□ 0.54
COMMD3Q9UBI1 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
COMMD3Q9UBI1 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
COMMD3Q9UBI1 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
COMMD3Q9UBI1 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
COMMD3Q9UBI1 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COMMD3Q9UBI1 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
COMMD3Q9UBI1 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COMMD3Q9UBI1 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
COMMD3Q9UBI1 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COMMD3Q9UBI1 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COMMD3Q9UBI1 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.41■□□□□ 0.54
COMMD3Q9UBI1 KRT18P60-201ENST00000312876 1297 ntBASIC18.41■□□□□ 0.54
COMMD3Q9UBI1 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COMMD3Q9UBI1 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COMMD3Q9UBI1 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COMMD3Q9UBI1 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.41■□□□□ 0.54
COMMD3Q9UBI1 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms