Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CNIH4Q9P003 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNIH4Q9P003 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNIH4Q9P003 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CNIH4Q9P003 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.63■□□□□ 0.73
CNIH4Q9P003 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.63■□□□□ 0.73
CNIH4Q9P003 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNIH4Q9P003 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNIH4Q9P003 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNIH4Q9P003 Z98882.1-201ENST00000622160 2253 ntBASIC19.63■□□□□ 0.73
CNIH4Q9P003 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CNIH4Q9P003 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNIH4Q9P003 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.62■□□□□ 0.73
CNIH4Q9P003 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNIH4Q9P003 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CNIH4Q9P003 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.62■□□□□ 0.73
CNIH4Q9P003 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.62■□□□□ 0.73
CNIH4Q9P003 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CNIH4Q9P003 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.62■□□□□ 0.73
CNIH4Q9P003 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.62■□□□□ 0.73
CNIH4Q9P003 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.62■□□□□ 0.73
CNIH4Q9P003 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CNIH4Q9P003 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNIH4Q9P003 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.62■□□□□ 0.73
CNIH4Q9P003 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNIH4Q9P003 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CNIH4Q9P003 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CNIH4Q9P003 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.61■□□□□ 0.73
CNIH4Q9P003 AP004607.4-201ENST00000530158 1459 ntBASIC19.61■□□□□ 0.73
CNIH4Q9P003 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNIH4Q9P003 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.61■□□□□ 0.73
CNIH4Q9P003 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNIH4Q9P003 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNIH4Q9P003 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CNIH4Q9P003 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.61■□□□□ 0.73
CNIH4Q9P003 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CNIH4Q9P003 AC022517.1-201ENST00000592429 346 ntBASIC19.61■□□□□ 0.73
CNIH4Q9P003 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.61■□□□□ 0.73
CNIH4Q9P003 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.61■□□□□ 0.73
CNIH4Q9P003 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNIH4Q9P003 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNIH4Q9P003 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CNIH4Q9P003 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNIH4Q9P003 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNIH4Q9P003 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNIH4Q9P003 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CNIH4Q9P003 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNIH4Q9P003 KRT87P-202ENST00000534226 1464 ntBASIC19.6■□□□□ 0.73
CNIH4Q9P003 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CNIH4Q9P003 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CNIH4Q9P003 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CNIH4Q9P003 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CNIH4Q9P003 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
CNIH4Q9P003 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.6■□□□□ 0.73
CNIH4Q9P003 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CNIH4Q9P003 KRT19P1-201ENST00000405746 1186 ntBASIC19.6■□□□□ 0.73
CNIH4Q9P003 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CNIH4Q9P003 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.6■□□□□ 0.73
CNIH4Q9P003 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.6■□□□□ 0.73
CNIH4Q9P003 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.6■□□□□ 0.73
CNIH4Q9P003 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.6■□□□□ 0.73
CNIH4Q9P003 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CNIH4Q9P003 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.6■□□□□ 0.73
CNIH4Q9P003 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CNIH4Q9P003 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CNIH4Q9P003 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.6■□□□□ 0.73
CNIH4Q9P003 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.6■□□□□ 0.73
CNIH4Q9P003 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.6■□□□□ 0.73
CNIH4Q9P003 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CNIH4Q9P003 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CNIH4Q9P003 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.6■□□□□ 0.73
CNIH4Q9P003 AF106564.1-201ENST00000607058 2553 ntBASIC19.59■□□□□ 0.73
CNIH4Q9P003 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNIH4Q9P003 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.59■□□□□ 0.73
CNIH4Q9P003 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.59■□□□□ 0.73
CNIH4Q9P003 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.59■□□□□ 0.73
CNIH4Q9P003 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNIH4Q9P003 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CNIH4Q9P003 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CNIH4Q9P003 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CNIH4Q9P003 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.59■□□□□ 0.73
CNIH4Q9P003 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNIH4Q9P003 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNIH4Q9P003 AC004854.2-201ENST00000608450 1441 ntBASIC19.59■□□□□ 0.73
CNIH4Q9P003 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
CNIH4Q9P003 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CNIH4Q9P003 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CNIH4Q9P003 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
CNIH4Q9P003 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
CNIH4Q9P003 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CNIH4Q9P003 AP006587.3-201ENST00000525742 1516 ntBASIC19.58■□□□□ 0.73
CNIH4Q9P003 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CNIH4Q9P003 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
CNIH4Q9P003 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.58■□□□□ 0.73
CNIH4Q9P003 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.58■□□□□ 0.72
CNIH4Q9P003 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.58■□□□□ 0.72
CNIH4Q9P003 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.58■□□□□ 0.72
CNIH4Q9P003 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
CNIH4Q9P003 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CNIH4Q9P003 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms