Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PARPBPQ9NWS1 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PARPBPQ9NWS1 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
PARPBPQ9NWS1 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PARPBPQ9NWS1 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
PARPBPQ9NWS1 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PARPBPQ9NWS1 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PARPBPQ9NWS1 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
PARPBPQ9NWS1 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.76■□□□□ 0.59
PARPBPQ9NWS1 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.76■□□□□ 0.59
PARPBPQ9NWS1 AC138907.5-202ENST00000569484 235 ntBASIC18.76■□□□□ 0.59
PARPBPQ9NWS1 AC104187.1-201ENST00000607510 612 ntBASIC18.76■□□□□ 0.59
PARPBPQ9NWS1 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.76■□□□□ 0.59
PARPBPQ9NWS1 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PARPBPQ9NWS1 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PARPBPQ9NWS1 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
PARPBPQ9NWS1 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PARPBPQ9NWS1 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
PARPBPQ9NWS1 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PARPBPQ9NWS1 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PARPBPQ9NWS1 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PARPBPQ9NWS1 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.76■□□□□ 0.59
PARPBPQ9NWS1 LINC00565-201ENST00000562710 2331 ntBASIC18.75■□□□□ 0.59
PARPBPQ9NWS1 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PARPBPQ9NWS1 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PARPBPQ9NWS1 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PARPBPQ9NWS1 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PARPBPQ9NWS1 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PARPBPQ9NWS1 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PARPBPQ9NWS1 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.75■□□□□ 0.59
PARPBPQ9NWS1 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PARPBPQ9NWS1 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.75■□□□□ 0.59
PARPBPQ9NWS1 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.75■□□□□ 0.59
PARPBPQ9NWS1 AC008175.2-201ENST00000612840 297 ntBASIC18.75■□□□□ 0.59
PARPBPQ9NWS1 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
PARPBPQ9NWS1 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
PARPBPQ9NWS1 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PARPBPQ9NWS1 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PARPBPQ9NWS1 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.75■□□□□ 0.59
PARPBPQ9NWS1 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.74■□□□□ 0.59
PARPBPQ9NWS1 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PARPBPQ9NWS1 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
PARPBPQ9NWS1 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PARPBPQ9NWS1 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PARPBPQ9NWS1 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PARPBPQ9NWS1 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.74■□□□□ 0.59
PARPBPQ9NWS1 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PARPBPQ9NWS1 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.74■□□□□ 0.59
PARPBPQ9NWS1 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PARPBPQ9NWS1 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.74■□□□□ 0.59
PARPBPQ9NWS1 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.74■□□□□ 0.59
PARPBPQ9NWS1 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.74■□□□□ 0.59
PARPBPQ9NWS1 AC120498.10-201ENST00000621827 505 ntBASIC18.74■□□□□ 0.59
PARPBPQ9NWS1 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PARPBPQ9NWS1 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PARPBPQ9NWS1 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
PARPBPQ9NWS1 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.74■□□□□ 0.59
PARPBPQ9NWS1 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PARPBPQ9NWS1 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PARPBPQ9NWS1 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PARPBPQ9NWS1 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.73■□□□□ 0.59
PARPBPQ9NWS1 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PARPBPQ9NWS1 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.73■□□□□ 0.59
PARPBPQ9NWS1 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.73■□□□□ 0.59
PARPBPQ9NWS1 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PARPBPQ9NWS1 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PARPBPQ9NWS1 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PARPBPQ9NWS1 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PARPBPQ9NWS1 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PARPBPQ9NWS1 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PARPBPQ9NWS1 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PARPBPQ9NWS1 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PARPBPQ9NWS1 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
PARPBPQ9NWS1 POU5F1P4-201ENST00000413175 1085 ntBASIC18.73■□□□□ 0.59
PARPBPQ9NWS1 KRT18P20-201ENST00000548986 1279 ntBASIC18.73■□□□□ 0.59
PARPBPQ9NWS1 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.73■□□□□ 0.59
PARPBPQ9NWS1 AP001160.3-201ENST00000601484 763 ntBASIC18.73■□□□□ 0.59
PARPBPQ9NWS1 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PARPBPQ9NWS1 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PARPBPQ9NWS1 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PARPBPQ9NWS1 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
PARPBPQ9NWS1 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PARPBPQ9NWS1 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PARPBPQ9NWS1 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PARPBPQ9NWS1 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PARPBPQ9NWS1 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PARPBPQ9NWS1 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PARPBPQ9NWS1 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PARPBPQ9NWS1 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.72■□□□□ 0.59
PARPBPQ9NWS1 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PARPBPQ9NWS1 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PARPBPQ9NWS1 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.72■□□□□ 0.59
PARPBPQ9NWS1 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.72■□□□□ 0.59
PARPBPQ9NWS1 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.72■□□□□ 0.59
PARPBPQ9NWS1 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.72■□□□□ 0.59
PARPBPQ9NWS1 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.72■□□□□ 0.59
PARPBPQ9NWS1 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PARPBPQ9NWS1 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.72■□□□□ 0.59
PARPBPQ9NWS1 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PARPBPQ9NWS1 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms