Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NECTIN3Q9NQS3 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NECTIN3Q9NQS3 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.1■□□□□ 0.81
NECTIN3Q9NQS3 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NECTIN3Q9NQS3 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.09■□□□□ 0.81
NECTIN3Q9NQS3 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
NECTIN3Q9NQS3 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
NECTIN3Q9NQS3 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
NECTIN3Q9NQS3 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NECTIN3Q9NQS3 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.09■□□□□ 0.81
NECTIN3Q9NQS3 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
NECTIN3Q9NQS3 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.09■□□□□ 0.81
NECTIN3Q9NQS3 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.09■□□□□ 0.81
NECTIN3Q9NQS3 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NECTIN3Q9NQS3 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.09■□□□□ 0.81
NECTIN3Q9NQS3 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NECTIN3Q9NQS3 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.09■□□□□ 0.81
NECTIN3Q9NQS3 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NECTIN3Q9NQS3 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NECTIN3Q9NQS3 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NECTIN3Q9NQS3 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
NECTIN3Q9NQS3 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
NECTIN3Q9NQS3 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.08■□□□□ 0.81
NECTIN3Q9NQS3 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NECTIN3Q9NQS3 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.08■□□□□ 0.81
NECTIN3Q9NQS3 AP006587.3-201ENST00000525742 1516 ntBASIC20.08■□□□□ 0.81
NECTIN3Q9NQS3 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
NECTIN3Q9NQS3 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.08■□□□□ 0.81
NECTIN3Q9NQS3 KRT18P5-201ENST00000436075 1291 ntBASIC20.08■□□□□ 0.81
NECTIN3Q9NQS3 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.08■□□□□ 0.81
NECTIN3Q9NQS3 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
NECTIN3Q9NQS3 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
NECTIN3Q9NQS3 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NECTIN3Q9NQS3 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.08■□□□□ 0.8
NECTIN3Q9NQS3 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NECTIN3Q9NQS3 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
NECTIN3Q9NQS3 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NECTIN3Q9NQS3 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NECTIN3Q9NQS3 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.07■□□□□ 0.8
NECTIN3Q9NQS3 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NECTIN3Q9NQS3 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
NECTIN3Q9NQS3 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
NECTIN3Q9NQS3 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NECTIN3Q9NQS3 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.07■□□□□ 0.8
NECTIN3Q9NQS3 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NECTIN3Q9NQS3 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.07■□□□□ 0.8
NECTIN3Q9NQS3 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NECTIN3Q9NQS3 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.06■□□□□ 0.8
NECTIN3Q9NQS3 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
NECTIN3Q9NQS3 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NECTIN3Q9NQS3 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NECTIN3Q9NQS3 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
NECTIN3Q9NQS3 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NECTIN3Q9NQS3 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.06■□□□□ 0.8
NECTIN3Q9NQS3 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NECTIN3Q9NQS3 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.06■□□□□ 0.8
NECTIN3Q9NQS3 AC079140.4-201ENST00000507448 529 ntBASIC20.06■□□□□ 0.8
NECTIN3Q9NQS3 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.06■□□□□ 0.8
NECTIN3Q9NQS3 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.06■□□□□ 0.8
NECTIN3Q9NQS3 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NECTIN3Q9NQS3 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
NECTIN3Q9NQS3 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.06■□□□□ 0.8
NECTIN3Q9NQS3 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
NECTIN3Q9NQS3 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
NECTIN3Q9NQS3 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
NECTIN3Q9NQS3 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NECTIN3Q9NQS3 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
NECTIN3Q9NQS3 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NECTIN3Q9NQS3 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NECTIN3Q9NQS3 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.05■□□□□ 0.8
NECTIN3Q9NQS3 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NECTIN3Q9NQS3 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NECTIN3Q9NQS3 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NECTIN3Q9NQS3 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.05■□□□□ 0.8
NECTIN3Q9NQS3 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NECTIN3Q9NQS3 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
NECTIN3Q9NQS3 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NECTIN3Q9NQS3 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.05■□□□□ 0.8
NECTIN3Q9NQS3 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NECTIN3Q9NQS3 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NECTIN3Q9NQS3 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.05■□□□□ 0.8
NECTIN3Q9NQS3 NTF6G-201ENST00000591094 616 ntBASIC20.05■□□□□ 0.8
NECTIN3Q9NQS3 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
NECTIN3Q9NQS3 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NECTIN3Q9NQS3 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
NECTIN3Q9NQS3 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
NECTIN3Q9NQS3 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NECTIN3Q9NQS3 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.04■□□□□ 0.8
NECTIN3Q9NQS3 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
NECTIN3Q9NQS3 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
NECTIN3Q9NQS3 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NECTIN3Q9NQS3 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
NECTIN3Q9NQS3 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.04■□□□□ 0.8
NECTIN3Q9NQS3 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
NECTIN3Q9NQS3 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.04■□□□□ 0.8
NECTIN3Q9NQS3 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
NECTIN3Q9NQS3 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
NECTIN3Q9NQS3 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
NECTIN3Q9NQS3 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
NECTIN3Q9NQS3 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms