Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
ZFYVE28Q9HCC9 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
ZFYVE28Q9HCC9 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC24.25■■□□□ 1.47
ZFYVE28Q9HCC9 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
ZFYVE28Q9HCC9 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
ZFYVE28Q9HCC9 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC24.25■■□□□ 1.47
ZFYVE28Q9HCC9 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
ZFYVE28Q9HCC9 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC24.25■■□□□ 1.47
ZFYVE28Q9HCC9 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC24.25■■□□□ 1.47
ZFYVE28Q9HCC9 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC24.25■■□□□ 1.47
ZFYVE28Q9HCC9 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC24.25■■□□□ 1.47
ZFYVE28Q9HCC9 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC24.25■■□□□ 1.47
ZFYVE28Q9HCC9 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
ZFYVE28Q9HCC9 AC092368.3-202ENST00000574180 1591 ntBASIC24.25■■□□□ 1.47
ZFYVE28Q9HCC9 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
ZFYVE28Q9HCC9 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
ZFYVE28Q9HCC9 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
ZFYVE28Q9HCC9 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
ZFYVE28Q9HCC9 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
ZFYVE28Q9HCC9 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
ZFYVE28Q9HCC9 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC24.24■■□□□ 1.47
ZFYVE28Q9HCC9 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
ZFYVE28Q9HCC9 CDV3P1-201ENST00000471403 739 ntBASIC24.24■■□□□ 1.47
ZFYVE28Q9HCC9 RPS20-210ENST00000523936 899 ntTSL 2 BASIC24.24■■□□□ 1.47
ZFYVE28Q9HCC9 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC24.24■■□□□ 1.47
ZFYVE28Q9HCC9 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC24.24■■□□□ 1.47
ZFYVE28Q9HCC9 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
ZFYVE28Q9HCC9 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
ZFYVE28Q9HCC9 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC24.23■■□□□ 1.47
ZFYVE28Q9HCC9 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
ZFYVE28Q9HCC9 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
ZFYVE28Q9HCC9 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
ZFYVE28Q9HCC9 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
ZFYVE28Q9HCC9 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC24.22■■□□□ 1.47
ZFYVE28Q9HCC9 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
ZFYVE28Q9HCC9 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
ZFYVE28Q9HCC9 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
ZFYVE28Q9HCC9 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
ZFYVE28Q9HCC9 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC24.22■■□□□ 1.47
ZFYVE28Q9HCC9 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC24.22■■□□□ 1.47
ZFYVE28Q9HCC9 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
ZFYVE28Q9HCC9 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
ZFYVE28Q9HCC9 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
ZFYVE28Q9HCC9 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
ZFYVE28Q9HCC9 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
ZFYVE28Q9HCC9 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC24.21■■□□□ 1.47
ZFYVE28Q9HCC9 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC24.21■■□□□ 1.47
ZFYVE28Q9HCC9 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
ZFYVE28Q9HCC9 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
ZFYVE28Q9HCC9 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
ZFYVE28Q9HCC9 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC24.2■■□□□ 1.46
ZFYVE28Q9HCC9 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC24.2■■□□□ 1.46
ZFYVE28Q9HCC9 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC24.2■■□□□ 1.46
ZFYVE28Q9HCC9 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
ZFYVE28Q9HCC9 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
ZFYVE28Q9HCC9 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC24.2■■□□□ 1.46
ZFYVE28Q9HCC9 AC091799.1-201ENST00000422823 811 ntBASIC24.2■■□□□ 1.46
ZFYVE28Q9HCC9 AC233263.1-201ENST00000578059 224 ntBASIC24.2■■□□□ 1.46
ZFYVE28Q9HCC9 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
ZFYVE28Q9HCC9 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC24.19■■□□□ 1.46
ZFYVE28Q9HCC9 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
ZFYVE28Q9HCC9 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
ZFYVE28Q9HCC9 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
ZFYVE28Q9HCC9 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
ZFYVE28Q9HCC9 MCRIP2P1-201ENST00000394346 511 ntBASIC24.19■■□□□ 1.46
ZFYVE28Q9HCC9 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC24.19■■□□□ 1.46
ZFYVE28Q9HCC9 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC24.19■■□□□ 1.46
ZFYVE28Q9HCC9 OR2A1-AS1-207ENST00000486094 819 ntBASIC24.19■■□□□ 1.46
ZFYVE28Q9HCC9 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC24.19■■□□□ 1.46
ZFYVE28Q9HCC9 KRT18P21-201ENST00000515767 1272 ntBASIC24.19■■□□□ 1.46
ZFYVE28Q9HCC9 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
ZFYVE28Q9HCC9 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC24.19■■□□□ 1.46
ZFYVE28Q9HCC9 AC069544.1-201ENST00000609399 999 ntBASIC24.19■■□□□ 1.46
ZFYVE28Q9HCC9 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
ZFYVE28Q9HCC9 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
ZFYVE28Q9HCC9 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC24.19■■□□□ 1.46
ZFYVE28Q9HCC9 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
ZFYVE28Q9HCC9 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC24.19■■□□□ 1.46
ZFYVE28Q9HCC9 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC24.18■■□□□ 1.46
ZFYVE28Q9HCC9 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
ZFYVE28Q9HCC9 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC24.18■■□□□ 1.46
ZFYVE28Q9HCC9 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
ZFYVE28Q9HCC9 MDFI-202ENST00000373050 809 ntTSL 2 BASIC24.18■■□□□ 1.46
ZFYVE28Q9HCC9 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
ZFYVE28Q9HCC9 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
ZFYVE28Q9HCC9 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
ZFYVE28Q9HCC9 MAX-217ENST00000557277 728 ntTSL 3 BASIC24.18■■□□□ 1.46
ZFYVE28Q9HCC9 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
ZFYVE28Q9HCC9 SOX15-203ENST00000570788 1093 ntBASIC24.18■■□□□ 1.46
ZFYVE28Q9HCC9 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
ZFYVE28Q9HCC9 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
ZFYVE28Q9HCC9 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
ZFYVE28Q9HCC9 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
ZFYVE28Q9HCC9 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC24.17■■□□□ 1.46
ZFYVE28Q9HCC9 MFF-205ENST00000354503 1085 ntTSL 2 BASIC24.17■■□□□ 1.46
ZFYVE28Q9HCC9 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
ZFYVE28Q9HCC9 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
ZFYVE28Q9HCC9 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
ZFYVE28Q9HCC9 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
ZFYVE28Q9HCC9 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC24.17■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms