Protein–RNA interactions for Protein: Q9H8Y1

VRTN, Vertnin, humanhuman

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRTNQ9H8Y1 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
VRTNQ9H8Y1 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC22.49■■□□□ 1.19
VRTNQ9H8Y1 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
VRTNQ9H8Y1 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
VRTNQ9H8Y1 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
VRTNQ9H8Y1 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
VRTNQ9H8Y1 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
VRTNQ9H8Y1 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
VRTNQ9H8Y1 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
VRTNQ9H8Y1 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
VRTNQ9H8Y1 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC22.48■■□□□ 1.19
VRTNQ9H8Y1 AL137784.2-201ENST00000607332 1000 ntBASIC22.48■■□□□ 1.19
VRTNQ9H8Y1 AC092666.2-201ENST00000613287 246 ntBASIC22.48■■□□□ 1.19
VRTNQ9H8Y1 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC22.48■■□□□ 1.19
VRTNQ9H8Y1 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC22.48■■□□□ 1.19
VRTNQ9H8Y1 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
VRTNQ9H8Y1 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
VRTNQ9H8Y1 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
VRTNQ9H8Y1 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
VRTNQ9H8Y1 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC22.47■■□□□ 1.19
VRTNQ9H8Y1 MFSD11-216ENST00000590393 1141 ntBASIC22.47■■□□□ 1.19
VRTNQ9H8Y1 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC22.47■■□□□ 1.19
VRTNQ9H8Y1 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC22.47■■□□□ 1.19
VRTNQ9H8Y1 WWC2-AS2-201ENST00000578387 2183 ntBASIC22.47■■□□□ 1.19
VRTNQ9H8Y1 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
VRTNQ9H8Y1 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC22.47■■□□□ 1.19
VRTNQ9H8Y1 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
VRTNQ9H8Y1 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
VRTNQ9H8Y1 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
VRTNQ9H8Y1 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
VRTNQ9H8Y1 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
VRTNQ9H8Y1 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC22.46■■□□□ 1.19
VRTNQ9H8Y1 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC22.46■■□□□ 1.19
VRTNQ9H8Y1 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.19
VRTNQ9H8Y1 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC22.46■■□□□ 1.19
VRTNQ9H8Y1 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.46■■□□□ 1.19
VRTNQ9H8Y1 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
VRTNQ9H8Y1 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC22.46■■□□□ 1.19
VRTNQ9H8Y1 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC22.46■■□□□ 1.19
VRTNQ9H8Y1 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
VRTNQ9H8Y1 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.19
VRTNQ9H8Y1 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.19
VRTNQ9H8Y1 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
VRTNQ9H8Y1 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC22.45■■□□□ 1.18
VRTNQ9H8Y1 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
VRTNQ9H8Y1 AC243732.1-201ENST00000612648 864 ntBASIC22.45■■□□□ 1.18
VRTNQ9H8Y1 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC22.45■■□□□ 1.18
VRTNQ9H8Y1 BID-214ENST00000617586 542 ntTSL 5 BASIC22.45■■□□□ 1.18
VRTNQ9H8Y1 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
VRTNQ9H8Y1 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
VRTNQ9H8Y1 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
VRTNQ9H8Y1 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
VRTNQ9H8Y1 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
VRTNQ9H8Y1 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
VRTNQ9H8Y1 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC22.45■■□□□ 1.18
VRTNQ9H8Y1 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
VRTNQ9H8Y1 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC22.45■■□□□ 1.18
VRTNQ9H8Y1 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
VRTNQ9H8Y1 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
VRTNQ9H8Y1 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
VRTNQ9H8Y1 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
VRTNQ9H8Y1 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
VRTNQ9H8Y1 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
VRTNQ9H8Y1 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
VRTNQ9H8Y1 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
VRTNQ9H8Y1 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC22.44■■□□□ 1.18
VRTNQ9H8Y1 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC22.44■■□□□ 1.18
VRTNQ9H8Y1 DYM-203ENST00000442713 2147 ntTSL 2 BASIC22.44■■□□□ 1.18
VRTNQ9H8Y1 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC22.44■■□□□ 1.18
VRTNQ9H8Y1 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC22.44■■□□□ 1.18
VRTNQ9H8Y1 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC22.44■■□□□ 1.18
VRTNQ9H8Y1 PARN-205ENST00000539279 1557 ntTSL 2 BASIC22.44■■□□□ 1.18
VRTNQ9H8Y1 BRI3-207ENST00000539286 699 ntTSL 2 BASIC22.44■■□□□ 1.18
VRTNQ9H8Y1 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
VRTNQ9H8Y1 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
VRTNQ9H8Y1 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
VRTNQ9H8Y1 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
VRTNQ9H8Y1 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
VRTNQ9H8Y1 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
VRTNQ9H8Y1 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
VRTNQ9H8Y1 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
VRTNQ9H8Y1 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
VRTNQ9H8Y1 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
VRTNQ9H8Y1 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC22.43■■□□□ 1.18
VRTNQ9H8Y1 AC011767.1-201ENST00000617410 1153 ntBASIC22.43■■□□□ 1.18
VRTNQ9H8Y1 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC22.43■■□□□ 1.18
VRTNQ9H8Y1 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
VRTNQ9H8Y1 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC22.43■■□□□ 1.18
VRTNQ9H8Y1 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
VRTNQ9H8Y1 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
VRTNQ9H8Y1 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
VRTNQ9H8Y1 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC22.43■■□□□ 1.18
VRTNQ9H8Y1 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC22.42■■□□□ 1.18
VRTNQ9H8Y1 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
VRTNQ9H8Y1 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC22.42■■□□□ 1.18
VRTNQ9H8Y1 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC22.42■■□□□ 1.18
VRTNQ9H8Y1 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC22.42■■□□□ 1.18
VRTNQ9H8Y1 AC010536.3-201ENST00000620306 533 ntBASIC22.42■■□□□ 1.18
VRTNQ9H8Y1 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC22.42■■□□□ 1.18
VRTNQ9H8Y1 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms