Protein–RNA interactions for Protein: Q9H6L5

RETREG1, Reticulophagy regulator 1, humanhuman

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1Q9H6L5 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.49■■□□□ 1.03
RETREG1Q9H6L5 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RETREG1Q9H6L5 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RETREG1Q9H6L5 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RETREG1Q9H6L5 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
RETREG1Q9H6L5 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RETREG1Q9H6L5 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.49■■□□□ 1.03
RETREG1Q9H6L5 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RETREG1Q9H6L5 FBXW4P1-201ENST00000426721 2239 ntBASIC21.49■■□□□ 1.03
RETREG1Q9H6L5 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
RETREG1Q9H6L5 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
RETREG1Q9H6L5 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
RETREG1Q9H6L5 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.49■■□□□ 1.03
RETREG1Q9H6L5 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RETREG1Q9H6L5 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.48■■□□□ 1.03
RETREG1Q9H6L5 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RETREG1Q9H6L5 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RETREG1Q9H6L5 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RETREG1Q9H6L5 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RETREG1Q9H6L5 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RETREG1Q9H6L5 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.48■■□□□ 1.03
RETREG1Q9H6L5 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
RETREG1Q9H6L5 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.48■■□□□ 1.03
RETREG1Q9H6L5 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.48■■□□□ 1.03
RETREG1Q9H6L5 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.48■■□□□ 1.03
RETREG1Q9H6L5 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.48■■□□□ 1.03
RETREG1Q9H6L5 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RETREG1Q9H6L5 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
RETREG1Q9H6L5 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RETREG1Q9H6L5 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RETREG1Q9H6L5 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RETREG1Q9H6L5 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.47■■□□□ 1.03
RETREG1Q9H6L5 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
RETREG1Q9H6L5 AC245052.3-201ENST00000450182 901 ntBASIC21.47■■□□□ 1.03
RETREG1Q9H6L5 AC007322.4-201ENST00000509611 723 ntBASIC21.47■■□□□ 1.03
RETREG1Q9H6L5 MFSD11-216ENST00000590393 1141 ntBASIC21.47■■□□□ 1.03
RETREG1Q9H6L5 AC011767.1-201ENST00000617410 1153 ntBASIC21.47■■□□□ 1.03
RETREG1Q9H6L5 AC010536.3-201ENST00000620306 533 ntBASIC21.47■■□□□ 1.03
RETREG1Q9H6L5 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
RETREG1Q9H6L5 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
RETREG1Q9H6L5 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
RETREG1Q9H6L5 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
RETREG1Q9H6L5 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RETREG1Q9H6L5 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.46■■□□□ 1.03
RETREG1Q9H6L5 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RETREG1Q9H6L5 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.46■■□□□ 1.03
RETREG1Q9H6L5 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.46■■□□□ 1.03
RETREG1Q9H6L5 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.46■■□□□ 1.03
RETREG1Q9H6L5 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.46■■□□□ 1.03
RETREG1Q9H6L5 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.46■■□□□ 1.03
RETREG1Q9H6L5 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.46■■□□□ 1.03
RETREG1Q9H6L5 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
RETREG1Q9H6L5 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RETREG1Q9H6L5 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
RETREG1Q9H6L5 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RETREG1Q9H6L5 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RETREG1Q9H6L5 RBM17P2-201ENST00000616397 1405 ntBASIC21.46■■□□□ 1.03
RETREG1Q9H6L5 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.46■■□□□ 1.03
RETREG1Q9H6L5 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RETREG1Q9H6L5 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
RETREG1Q9H6L5 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RETREG1Q9H6L5 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RETREG1Q9H6L5 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RETREG1Q9H6L5 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RETREG1Q9H6L5 TERF1P5-201ENST00000477545 1207 ntBASIC21.45■■□□□ 1.02
RETREG1Q9H6L5 AL162412.1-201ENST00000567129 965 ntBASIC21.45■■□□□ 1.02
RETREG1Q9H6L5 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.45■■□□□ 1.02
RETREG1Q9H6L5 IKBKGP1-201ENST00000612193 1073 ntBASIC21.45■■□□□ 1.02
RETREG1Q9H6L5 AC231657.2-201ENST00000624556 255 ntBASIC21.45■■□□□ 1.02
RETREG1Q9H6L5 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RETREG1Q9H6L5 Z98882.1-201ENST00000622160 2253 ntBASIC21.45■■□□□ 1.02
RETREG1Q9H6L5 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.45■■□□□ 1.02
RETREG1Q9H6L5 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RETREG1Q9H6L5 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.45■■□□□ 1.02
RETREG1Q9H6L5 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RETREG1Q9H6L5 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RETREG1Q9H6L5 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RETREG1Q9H6L5 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.44■■□□□ 1.02
RETREG1Q9H6L5 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.44■■□□□ 1.02
RETREG1Q9H6L5 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.44■■□□□ 1.02
RETREG1Q9H6L5 AC013268.1-206ENST00000638368 961 ntBASIC21.44■■□□□ 1.02
RETREG1Q9H6L5 AC112229.1-201ENST00000639295 961 ntBASIC21.44■■□□□ 1.02
RETREG1Q9H6L5 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RETREG1Q9H6L5 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RETREG1Q9H6L5 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
RETREG1Q9H6L5 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RETREG1Q9H6L5 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RETREG1Q9H6L5 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.43■■□□□ 1.02
RETREG1Q9H6L5 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RETREG1Q9H6L5 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.43■■□□□ 1.02
RETREG1Q9H6L5 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RETREG1Q9H6L5 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.43■■□□□ 1.02
RETREG1Q9H6L5 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.43■■□□□ 1.02
RETREG1Q9H6L5 DUX4L16-201ENST00000555130 1264 ntBASIC21.43■■□□□ 1.02
RETREG1Q9H6L5 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
RETREG1Q9H6L5 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RETREG1Q9H6L5 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
RETREG1Q9H6L5 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RETREG1Q9H6L5 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RETREG1Q9H6L5 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms