Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 AP004607.7-201ENST00000527152 1677 ntBASIC20■□□□□ 0.79
PIF1Q9H611 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20■□□□□ 0.79
PIF1Q9H611 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PIF1Q9H611 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PIF1Q9H611 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PIF1Q9H611 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
PIF1Q9H611 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.99■□□□□ 0.79
PIF1Q9H611 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.99■□□□□ 0.79
PIF1Q9H611 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
PIF1Q9H611 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PIF1Q9H611 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PIF1Q9H611 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.99■□□□□ 0.79
PIF1Q9H611 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
PIF1Q9H611 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PIF1Q9H611 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.99■□□□□ 0.79
PIF1Q9H611 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.99■□□□□ 0.79
PIF1Q9H611 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
PIF1Q9H611 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PIF1Q9H611 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.99■□□□□ 0.79
PIF1Q9H611 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.99■□□□□ 0.79
PIF1Q9H611 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PIF1Q9H611 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PIF1Q9H611 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PIF1Q9H611 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
PIF1Q9H611 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
PIF1Q9H611 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.98■□□□□ 0.79
PIF1Q9H611 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.98■□□□□ 0.79
PIF1Q9H611 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
PIF1Q9H611 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.98■□□□□ 0.79
PIF1Q9H611 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.98■□□□□ 0.79
PIF1Q9H611 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PIF1Q9H611 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PIF1Q9H611 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.98■□□□□ 0.79
PIF1Q9H611 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PIF1Q9H611 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.98■□□□□ 0.79
PIF1Q9H611 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.98■□□□□ 0.79
PIF1Q9H611 AL512631.2-201ENST00000604634 923 ntBASIC19.98■□□□□ 0.79
PIF1Q9H611 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
PIF1Q9H611 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.98■□□□□ 0.79
PIF1Q9H611 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
PIF1Q9H611 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PIF1Q9H611 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PIF1Q9H611 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.98■□□□□ 0.79
PIF1Q9H611 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PIF1Q9H611 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PIF1Q9H611 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
PIF1Q9H611 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.97■□□□□ 0.79
PIF1Q9H611 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PIF1Q9H611 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
PIF1Q9H611 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.97■□□□□ 0.79
PIF1Q9H611 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.97■□□□□ 0.79
PIF1Q9H611 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.97■□□□□ 0.79
PIF1Q9H611 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.97■□□□□ 0.79
PIF1Q9H611 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.97■□□□□ 0.79
PIF1Q9H611 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.97■□□□□ 0.79
PIF1Q9H611 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PIF1Q9H611 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
PIF1Q9H611 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PIF1Q9H611 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
PIF1Q9H611 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.96■□□□□ 0.79
PIF1Q9H611 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PIF1Q9H611 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PIF1Q9H611 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PIF1Q9H611 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PIF1Q9H611 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PIF1Q9H611 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PIF1Q9H611 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PIF1Q9H611 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PIF1Q9H611 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PIF1Q9H611 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
PIF1Q9H611 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PIF1Q9H611 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.96■□□□□ 0.79
PIF1Q9H611 AC092171.4-201ENST00000609130 632 ntBASIC19.96■□□□□ 0.79
PIF1Q9H611 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PIF1Q9H611 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PIF1Q9H611 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.96■□□□□ 0.79
PIF1Q9H611 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.96■□□□□ 0.79
PIF1Q9H611 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PIF1Q9H611 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
PIF1Q9H611 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
PIF1Q9H611 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PIF1Q9H611 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PIF1Q9H611 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PIF1Q9H611 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.95■□□□□ 0.78
PIF1Q9H611 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.95■□□□□ 0.78
PIF1Q9H611 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PIF1Q9H611 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PIF1Q9H611 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PIF1Q9H611 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PIF1Q9H611 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PIF1Q9H611 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PIF1Q9H611 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.95■□□□□ 0.78
PIF1Q9H611 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.95■□□□□ 0.78
PIF1Q9H611 AC131212.1-201ENST00000613771 668 ntBASIC19.95■□□□□ 0.78
PIF1Q9H611 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.95■□□□□ 0.78
PIF1Q9H611 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PIF1Q9H611 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PIF1Q9H611 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
PIF1Q9H611 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
PIF1Q9H611 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms