Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NELFAQ9H3P2 Z98882.1-201ENST00000622160 2253 ntBASIC18.71■□□□□ 0.59
NELFAQ9H3P2 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NELFAQ9H3P2 AC007375.3-201ENST00000600936 2314 ntBASIC18.71■□□□□ 0.59
NELFAQ9H3P2 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
NELFAQ9H3P2 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NELFAQ9H3P2 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.71■□□□□ 0.59
NELFAQ9H3P2 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NELFAQ9H3P2 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.71■□□□□ 0.59
NELFAQ9H3P2 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.71■□□□□ 0.59
NELFAQ9H3P2 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
NELFAQ9H3P2 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NELFAQ9H3P2 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.71■□□□□ 0.59
NELFAQ9H3P2 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.71■□□□□ 0.59
NELFAQ9H3P2 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NELFAQ9H3P2 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.71■□□□□ 0.59
NELFAQ9H3P2 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NELFAQ9H3P2 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.71■□□□□ 0.59
NELFAQ9H3P2 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NELFAQ9H3P2 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.71■□□□□ 0.59
NELFAQ9H3P2 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NELFAQ9H3P2 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.71■□□□□ 0.59
NELFAQ9H3P2 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.71■□□□□ 0.59
NELFAQ9H3P2 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
NELFAQ9H3P2 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NELFAQ9H3P2 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.71■□□□□ 0.59
NELFAQ9H3P2 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NELFAQ9H3P2 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NELFAQ9H3P2 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NELFAQ9H3P2 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
NELFAQ9H3P2 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NELFAQ9H3P2 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.7■□□□□ 0.58
NELFAQ9H3P2 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
NELFAQ9H3P2 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.7■□□□□ 0.58
NELFAQ9H3P2 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
NELFAQ9H3P2 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
NELFAQ9H3P2 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
NELFAQ9H3P2 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
NELFAQ9H3P2 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.7■□□□□ 0.58
NELFAQ9H3P2 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NELFAQ9H3P2 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.7■□□□□ 0.58
NELFAQ9H3P2 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.7■□□□□ 0.58
NELFAQ9H3P2 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
NELFAQ9H3P2 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NELFAQ9H3P2 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.7■□□□□ 0.58
NELFAQ9H3P2 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
NELFAQ9H3P2 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NELFAQ9H3P2 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.7■□□□□ 0.58
NELFAQ9H3P2 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NELFAQ9H3P2 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NELFAQ9H3P2 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NELFAQ9H3P2 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.7■□□□□ 0.58
NELFAQ9H3P2 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NELFAQ9H3P2 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NELFAQ9H3P2 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NELFAQ9H3P2 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NELFAQ9H3P2 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NELFAQ9H3P2 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
NELFAQ9H3P2 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NELFAQ9H3P2 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.69■□□□□ 0.58
NELFAQ9H3P2 AC026310.3-201ENST00000625186 2373 ntBASIC18.69■□□□□ 0.58
NELFAQ9H3P2 AL024507.2-201ENST00000606070 2574 ntBASIC18.69■□□□□ 0.58
NELFAQ9H3P2 AL162430.1-201ENST00000480705 870 ntBASIC18.69■□□□□ 0.58
NELFAQ9H3P2 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
NELFAQ9H3P2 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NELFAQ9H3P2 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.69■□□□□ 0.58
NELFAQ9H3P2 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.69■□□□□ 0.58
NELFAQ9H3P2 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.69■□□□□ 0.58
NELFAQ9H3P2 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.68■□□□□ 0.58
NELFAQ9H3P2 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
NELFAQ9H3P2 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NELFAQ9H3P2 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.68■□□□□ 0.58
NELFAQ9H3P2 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
NELFAQ9H3P2 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
NELFAQ9H3P2 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.68■□□□□ 0.58
NELFAQ9H3P2 AC079140.4-201ENST00000507448 529 ntBASIC18.68■□□□□ 0.58
NELFAQ9H3P2 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.68■□□□□ 0.58
NELFAQ9H3P2 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.68■□□□□ 0.58
NELFAQ9H3P2 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.68■□□□□ 0.58
NELFAQ9H3P2 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.68■□□□□ 0.58
NELFAQ9H3P2 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
NELFAQ9H3P2 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NELFAQ9H3P2 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.68■□□□□ 0.58
NELFAQ9H3P2 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NELFAQ9H3P2 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NELFAQ9H3P2 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NELFAQ9H3P2 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NELFAQ9H3P2 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
NELFAQ9H3P2 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.67■□□□□ 0.58
NELFAQ9H3P2 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NELFAQ9H3P2 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NELFAQ9H3P2 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.67■□□□□ 0.58
NELFAQ9H3P2 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.67■□□□□ 0.58
NELFAQ9H3P2 KRT18P5-201ENST00000436075 1291 ntBASIC18.67■□□□□ 0.58
NELFAQ9H3P2 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NELFAQ9H3P2 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.67■□□□□ 0.58
NELFAQ9H3P2 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.67■□□□□ 0.58
NELFAQ9H3P2 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
NELFAQ9H3P2 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NELFAQ9H3P2 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms