Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC68Q9H2F9 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21■□□□□ 0.95
CCDC68Q9H2F9 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC68Q9H2F9 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC68Q9H2F9 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC68Q9H2F9 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
CCDC68Q9H2F9 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC68Q9H2F9 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21■□□□□ 0.95
CCDC68Q9H2F9 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC68Q9H2F9 AC012414.1-201ENST00000556676 535 ntBASIC21■□□□□ 0.95
CCDC68Q9H2F9 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC68Q9H2F9 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC68Q9H2F9 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21■□□□□ 0.95
CCDC68Q9H2F9 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CCDC68Q9H2F9 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CCDC68Q9H2F9 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC68Q9H2F9 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC68Q9H2F9 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CCDC68Q9H2F9 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC68Q9H2F9 AL358852.1-201ENST00000623174 1268 ntBASIC20.99■□□□□ 0.95
CCDC68Q9H2F9 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CCDC68Q9H2F9 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC68Q9H2F9 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC68Q9H2F9 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC68Q9H2F9 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC68Q9H2F9 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC68Q9H2F9 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC68Q9H2F9 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC68Q9H2F9 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC68Q9H2F9 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC68Q9H2F9 AC055733.4-201ENST00000638462 1354 ntBASIC20.98■□□□□ 0.95
CCDC68Q9H2F9 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC68Q9H2F9 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC68Q9H2F9 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC68Q9H2F9 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CCDC68Q9H2F9 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CCDC68Q9H2F9 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CCDC68Q9H2F9 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC68Q9H2F9 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC68Q9H2F9 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.98■□□□□ 0.95
CCDC68Q9H2F9 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC68Q9H2F9 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC68Q9H2F9 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC68Q9H2F9 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC68Q9H2F9 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC68Q9H2F9 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC68Q9H2F9 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC68Q9H2F9 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CCDC68Q9H2F9 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC68Q9H2F9 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC68Q9H2F9 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC68Q9H2F9 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC68Q9H2F9 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC68Q9H2F9 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC68Q9H2F9 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC68Q9H2F9 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.97■□□□□ 0.95
CCDC68Q9H2F9 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC68Q9H2F9 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC68Q9H2F9 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC68Q9H2F9 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.97■□□□□ 0.95
CCDC68Q9H2F9 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.97■□□□□ 0.95
CCDC68Q9H2F9 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.97■□□□□ 0.95
CCDC68Q9H2F9 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC68Q9H2F9 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC68Q9H2F9 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.97■□□□□ 0.95
CCDC68Q9H2F9 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC68Q9H2F9 AIRN-201ENST00000601203 4374 ntBASIC20.97■□□□□ 0.95
CCDC68Q9H2F9 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC68Q9H2F9 FEM1AP4-201ENST00000443167 1987 ntBASIC20.97■□□□□ 0.95
CCDC68Q9H2F9 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC68Q9H2F9 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC68Q9H2F9 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CCDC68Q9H2F9 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC68Q9H2F9 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC68Q9H2F9 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC68Q9H2F9 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC68Q9H2F9 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.96■□□□□ 0.95
CCDC68Q9H2F9 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC68Q9H2F9 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CCDC68Q9H2F9 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.96■□□□□ 0.95
CCDC68Q9H2F9 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC68Q9H2F9 AC105265.2-201ENST00000467189 838 ntBASIC20.96■□□□□ 0.95
CCDC68Q9H2F9 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.96■□□□□ 0.95
CCDC68Q9H2F9 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.96■□□□□ 0.95
CCDC68Q9H2F9 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC68Q9H2F9 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC68Q9H2F9 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.96■□□□□ 0.95
CCDC68Q9H2F9 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC68Q9H2F9 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC68Q9H2F9 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC68Q9H2F9 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC68Q9H2F9 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.95■□□□□ 0.95
CCDC68Q9H2F9 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.95
CCDC68Q9H2F9 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.95■□□□□ 0.94
CCDC68Q9H2F9 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC68Q9H2F9 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC68Q9H2F9 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC68Q9H2F9 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CCDC68Q9H2F9 AC005229.4-201ENST00000610085 2198 ntBASIC20.95■□□□□ 0.94
CCDC68Q9H2F9 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms