Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.07■■□□□ 1.28
VPS16Q9H269 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC23.07■■□□□ 1.28
VPS16Q9H269 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
VPS16Q9H269 LINC01521-201ENST00000504184 1943 ntBASIC23.07■■□□□ 1.28
VPS16Q9H269 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
VPS16Q9H269 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
VPS16Q9H269 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC23.07■■□□□ 1.28
VPS16Q9H269 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
VPS16Q9H269 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC23.06■■□□□ 1.28
VPS16Q9H269 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
VPS16Q9H269 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
VPS16Q9H269 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
VPS16Q9H269 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
VPS16Q9H269 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
VPS16Q9H269 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
VPS16Q9H269 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
VPS16Q9H269 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC23.06■■□□□ 1.28
VPS16Q9H269 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
VPS16Q9H269 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
VPS16Q9H269 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC23.06■■□□□ 1.28
VPS16Q9H269 AC131212.1-201ENST00000613771 668 ntBASIC23.06■■□□□ 1.28
VPS16Q9H269 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
VPS16Q9H269 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC23.06■■□□□ 1.28
VPS16Q9H269 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC23.06■■□□□ 1.28
VPS16Q9H269 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC23.06■■□□□ 1.28
VPS16Q9H269 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
VPS16Q9H269 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC23.06■■□□□ 1.28
VPS16Q9H269 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
VPS16Q9H269 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
VPS16Q9H269 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
VPS16Q9H269 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
VPS16Q9H269 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
VPS16Q9H269 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
VPS16Q9H269 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
VPS16Q9H269 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
VPS16Q9H269 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
VPS16Q9H269 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
VPS16Q9H269 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
VPS16Q9H269 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC23.05■■□□□ 1.28
VPS16Q9H269 FEM1AP1-201ENST00000431297 1995 ntBASIC23.05■■□□□ 1.28
VPS16Q9H269 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
VPS16Q9H269 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
VPS16Q9H269 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
VPS16Q9H269 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC23.04■■□□□ 1.28
VPS16Q9H269 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
VPS16Q9H269 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
VPS16Q9H269 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC23.04■■□□□ 1.28
VPS16Q9H269 IGHV3-19-201ENST00000521488 291 ntBASIC23.04■■□□□ 1.28
VPS16Q9H269 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC23.04■■□□□ 1.28
VPS16Q9H269 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC23.04■■□□□ 1.28
VPS16Q9H269 AC008764.7-201ENST00000593779 1081 ntBASIC23.04■■□□□ 1.28
VPS16Q9H269 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
VPS16Q9H269 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
VPS16Q9H269 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
VPS16Q9H269 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
VPS16Q9H269 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
VPS16Q9H269 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
VPS16Q9H269 AC135279.3-201ENST00000610945 1311 ntBASIC23.04■■□□□ 1.28
VPS16Q9H269 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
VPS16Q9H269 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
VPS16Q9H269 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
VPS16Q9H269 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC23.03■■□□□ 1.28
VPS16Q9H269 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
VPS16Q9H269 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC23.03■■□□□ 1.28
VPS16Q9H269 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
VPS16Q9H269 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC23.03■■□□□ 1.28
VPS16Q9H269 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC23.03■■□□□ 1.28
VPS16Q9H269 STX5-203ENST00000394690 1568 ntTSL 5 BASIC23.03■■□□□ 1.28
VPS16Q9H269 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC23.03■■□□□ 1.28
VPS16Q9H269 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC23.03■■□□□ 1.28
VPS16Q9H269 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC23.03■■□□□ 1.28
VPS16Q9H269 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
VPS16Q9H269 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
VPS16Q9H269 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC23.03■■□□□ 1.28
VPS16Q9H269 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC23.03■■□□□ 1.28
VPS16Q9H269 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
VPS16Q9H269 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
VPS16Q9H269 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
VPS16Q9H269 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
VPS16Q9H269 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
VPS16Q9H269 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
VPS16Q9H269 PLK5-205ENST00000642079 1969 ntBASIC23.02■■□□□ 1.28
VPS16Q9H269 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC23.02■■□□□ 1.28
VPS16Q9H269 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
VPS16Q9H269 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC23.02■■□□□ 1.28
VPS16Q9H269 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
VPS16Q9H269 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC23.02■■□□□ 1.28
VPS16Q9H269 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
VPS16Q9H269 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
VPS16Q9H269 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC23.02■■□□□ 1.28
VPS16Q9H269 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
VPS16Q9H269 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
VPS16Q9H269 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
VPS16Q9H269 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
VPS16Q9H269 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC23.01■■□□□ 1.27
VPS16Q9H269 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
VPS16Q9H269 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
VPS16Q9H269 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
VPS16Q9H269 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
VPS16Q9H269 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms