Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
CYSTM1Q9H1C7 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.43
CYSTM1Q9H1C7 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC12.33□□□□□ -0.44
CYSTM1Q9H1C7 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
CYSTM1Q9H1C7 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CYSTM1Q9H1C7 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CYSTM1Q9H1C7 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CYSTM1Q9H1C7 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC12.33□□□□□ -0.44
CYSTM1Q9H1C7 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CYSTM1Q9H1C7 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CYSTM1Q9H1C7 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CYSTM1Q9H1C7 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC12.33□□□□□ -0.44
CYSTM1Q9H1C7 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CYSTM1Q9H1C7 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CYSTM1Q9H1C7 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CYSTM1Q9H1C7 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CYSTM1Q9H1C7 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CYSTM1Q9H1C7 CEP83-AS1-201ENST00000623122 2482 ntBASIC12.33□□□□□ -0.44
CYSTM1Q9H1C7 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CYSTM1Q9H1C7 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
CYSTM1Q9H1C7 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
CYSTM1Q9H1C7 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CYSTM1Q9H1C7 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC12.33□□□□□ -0.44
CYSTM1Q9H1C7 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
CYSTM1Q9H1C7 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CYSTM1Q9H1C7 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CYSTM1Q9H1C7 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CYSTM1Q9H1C7 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC12.32□□□□□ -0.44
CYSTM1Q9H1C7 GOLGA2P6-201ENST00000340929 2049 ntBASIC12.32□□□□□ -0.44
CYSTM1Q9H1C7 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
CYSTM1Q9H1C7 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CYSTM1Q9H1C7 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC12.32□□□□□ -0.44
CYSTM1Q9H1C7 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
CYSTM1Q9H1C7 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CYSTM1Q9H1C7 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CYSTM1Q9H1C7 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CYSTM1Q9H1C7 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CYSTM1Q9H1C7 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CYSTM1Q9H1C7 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CYSTM1Q9H1C7 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CYSTM1Q9H1C7 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CYSTM1Q9H1C7 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CYSTM1Q9H1C7 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
CYSTM1Q9H1C7 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CYSTM1Q9H1C7 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
CYSTM1Q9H1C7 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CYSTM1Q9H1C7 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CYSTM1Q9H1C7 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CYSTM1Q9H1C7 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CYSTM1Q9H1C7 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CYSTM1Q9H1C7 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
CYSTM1Q9H1C7 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CYSTM1Q9H1C7 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CYSTM1Q9H1C7 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CYSTM1Q9H1C7 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CYSTM1Q9H1C7 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CYSTM1Q9H1C7 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC12.31□□□□□ -0.44
CYSTM1Q9H1C7 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CYSTM1Q9H1C7 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CYSTM1Q9H1C7 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC12.31□□□□□ -0.44
CYSTM1Q9H1C7 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CYSTM1Q9H1C7 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CYSTM1Q9H1C7 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CYSTM1Q9H1C7 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC12.31□□□□□ -0.44
CYSTM1Q9H1C7 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
CYSTM1Q9H1C7 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
CYSTM1Q9H1C7 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CYSTM1Q9H1C7 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CYSTM1Q9H1C7 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CYSTM1Q9H1C7 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CYSTM1Q9H1C7 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CYSTM1Q9H1C7 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CYSTM1Q9H1C7 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CYSTM1Q9H1C7 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CYSTM1Q9H1C7 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC12.31□□□□□ -0.44
CYSTM1Q9H1C7 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC12.31□□□□□ -0.44
CYSTM1Q9H1C7 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC12.31□□□□□ -0.44
CYSTM1Q9H1C7 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CYSTM1Q9H1C7 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CYSTM1Q9H1C7 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CYSTM1Q9H1C7 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CYSTM1Q9H1C7 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC12.3□□□□□ -0.44
CYSTM1Q9H1C7 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CYSTM1Q9H1C7 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CYSTM1Q9H1C7 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CYSTM1Q9H1C7 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC12.3□□□□□ -0.44
CYSTM1Q9H1C7 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CYSTM1Q9H1C7 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
CYSTM1Q9H1C7 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CYSTM1Q9H1C7 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CYSTM1Q9H1C7 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
CYSTM1Q9H1C7 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CYSTM1Q9H1C7 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CYSTM1Q9H1C7 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
CYSTM1Q9H1C7 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
CYSTM1Q9H1C7 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CYSTM1Q9H1C7 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
CYSTM1Q9H1C7 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CYSTM1Q9H1C7 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CYSTM1Q9H1C7 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms