Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
DDX47Q9H0S4 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
DDX47Q9H0S4 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
DDX47Q9H0S4 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.86■■□□□ 1.09
DDX47Q9H0S4 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
DDX47Q9H0S4 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.86■■□□□ 1.09
DDX47Q9H0S4 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.86■■□□□ 1.09
DDX47Q9H0S4 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.86■■□□□ 1.09
DDX47Q9H0S4 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
DDX47Q9H0S4 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
DDX47Q9H0S4 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
DDX47Q9H0S4 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
DDX47Q9H0S4 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
DDX47Q9H0S4 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.86■■□□□ 1.09
DDX47Q9H0S4 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
DDX47Q9H0S4 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
DDX47Q9H0S4 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
DDX47Q9H0S4 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
DDX47Q9H0S4 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.86■■□□□ 1.09
DDX47Q9H0S4 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
DDX47Q9H0S4 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
DDX47Q9H0S4 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.85■■□□□ 1.09
DDX47Q9H0S4 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
DDX47Q9H0S4 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
DDX47Q9H0S4 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.85■■□□□ 1.09
DDX47Q9H0S4 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.85■■□□□ 1.09
DDX47Q9H0S4 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
DDX47Q9H0S4 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
DDX47Q9H0S4 SERBP1P1-201ENST00000396021 1160 ntBASIC21.85■■□□□ 1.09
DDX47Q9H0S4 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.85■■□□□ 1.09
DDX47Q9H0S4 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
DDX47Q9H0S4 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
DDX47Q9H0S4 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
DDX47Q9H0S4 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
DDX47Q9H0S4 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
DDX47Q9H0S4 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
DDX47Q9H0S4 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
DDX47Q9H0S4 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
DDX47Q9H0S4 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
DDX47Q9H0S4 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
DDX47Q9H0S4 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.84■■□□□ 1.09
DDX47Q9H0S4 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
DDX47Q9H0S4 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
DDX47Q9H0S4 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
DDX47Q9H0S4 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.84■■□□□ 1.09
DDX47Q9H0S4 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.84■■□□□ 1.09
DDX47Q9H0S4 SLC47A1P1-202ENST00000449666 945 ntBASIC21.84■■□□□ 1.09
DDX47Q9H0S4 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.84■■□□□ 1.09
DDX47Q9H0S4 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
DDX47Q9H0S4 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
DDX47Q9H0S4 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.84■■□□□ 1.09
DDX47Q9H0S4 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
DDX47Q9H0S4 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
DDX47Q9H0S4 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.84■■□□□ 1.09
DDX47Q9H0S4 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
DDX47Q9H0S4 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
DDX47Q9H0S4 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
DDX47Q9H0S4 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
DDX47Q9H0S4 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
DDX47Q9H0S4 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.83■■□□□ 1.09
DDX47Q9H0S4 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.83■■□□□ 1.09
DDX47Q9H0S4 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
DDX47Q9H0S4 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
DDX47Q9H0S4 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
DDX47Q9H0S4 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
DDX47Q9H0S4 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
DDX47Q9H0S4 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
DDX47Q9H0S4 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
DDX47Q9H0S4 AP005435.1-201ENST00000529293 1178 ntBASIC21.83■■□□□ 1.09
DDX47Q9H0S4 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.83■■□□□ 1.09
DDX47Q9H0S4 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.83■■□□□ 1.09
DDX47Q9H0S4 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
DDX47Q9H0S4 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
DDX47Q9H0S4 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
DDX47Q9H0S4 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
DDX47Q9H0S4 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
DDX47Q9H0S4 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
DDX47Q9H0S4 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.82■■□□□ 1.08
DDX47Q9H0S4 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.82■■□□□ 1.08
DDX47Q9H0S4 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
DDX47Q9H0S4 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
DDX47Q9H0S4 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
DDX47Q9H0S4 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.82■■□□□ 1.08
DDX47Q9H0S4 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.82■■□□□ 1.08
DDX47Q9H0S4 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
DDX47Q9H0S4 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
DDX47Q9H0S4 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
DDX47Q9H0S4 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
DDX47Q9H0S4 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
DDX47Q9H0S4 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
DDX47Q9H0S4 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
DDX47Q9H0S4 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.82■■□□□ 1.08
DDX47Q9H0S4 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
DDX47Q9H0S4 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
DDX47Q9H0S4 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
DDX47Q9H0S4 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
DDX47Q9H0S4 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
DDX47Q9H0S4 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
DDX47Q9H0S4 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
DDX47Q9H0S4 GUSBP5-201ENST00000418136 578 ntBASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms