Protein–RNA interactions for Protein: Q9BT78

COPS4, COP9 signalosome complex subunit 4, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4Q9BT78 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
COPS4Q9BT78 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.2■□□□□ 0.66
COPS4Q9BT78 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COPS4Q9BT78 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
COPS4Q9BT78 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COPS4Q9BT78 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COPS4Q9BT78 AL499627.2-201ENST00000606283 725 ntBASIC19.2■□□□□ 0.66
COPS4Q9BT78 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.2■□□□□ 0.66
COPS4Q9BT78 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.2■□□□□ 0.66
COPS4Q9BT78 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
COPS4Q9BT78 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
COPS4Q9BT78 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
COPS4Q9BT78 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
COPS4Q9BT78 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
COPS4Q9BT78 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.19■□□□□ 0.66
COPS4Q9BT78 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COPS4Q9BT78 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
COPS4Q9BT78 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.19■□□□□ 0.66
COPS4Q9BT78 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COPS4Q9BT78 OR7E47P-201ENST00000546390 1422 ntBASIC19.19■□□□□ 0.66
COPS4Q9BT78 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
COPS4Q9BT78 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.19■□□□□ 0.66
COPS4Q9BT78 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COPS4Q9BT78 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.19■□□□□ 0.66
COPS4Q9BT78 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COPS4Q9BT78 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
COPS4Q9BT78 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COPS4Q9BT78 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.19■□□□□ 0.66
COPS4Q9BT78 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
COPS4Q9BT78 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
COPS4Q9BT78 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.19■□□□□ 0.66
COPS4Q9BT78 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
COPS4Q9BT78 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
COPS4Q9BT78 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
COPS4Q9BT78 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COPS4Q9BT78 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COPS4Q9BT78 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
COPS4Q9BT78 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.18■□□□□ 0.66
COPS4Q9BT78 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
COPS4Q9BT78 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COPS4Q9BT78 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.18■□□□□ 0.66
COPS4Q9BT78 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.18■□□□□ 0.66
COPS4Q9BT78 MIR3621-201ENST00000580529 85 ntBASIC19.18■□□□□ 0.66
COPS4Q9BT78 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.18■□□□□ 0.66
COPS4Q9BT78 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COPS4Q9BT78 AL391422.3-201ENST00000603791 2761 ntBASIC19.18■□□□□ 0.66
COPS4Q9BT78 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COPS4Q9BT78 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COPS4Q9BT78 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COPS4Q9BT78 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
COPS4Q9BT78 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
COPS4Q9BT78 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
COPS4Q9BT78 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
COPS4Q9BT78 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COPS4Q9BT78 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COPS4Q9BT78 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.17■□□□□ 0.66
COPS4Q9BT78 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.17■□□□□ 0.66
COPS4Q9BT78 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
COPS4Q9BT78 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
COPS4Q9BT78 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COPS4Q9BT78 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COPS4Q9BT78 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
COPS4Q9BT78 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
COPS4Q9BT78 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COPS4Q9BT78 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COPS4Q9BT78 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.17■□□□□ 0.66
COPS4Q9BT78 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COPS4Q9BT78 AC073314.1-201ENST00000568729 2216 ntBASIC19.17■□□□□ 0.66
COPS4Q9BT78 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.17■□□□□ 0.66
COPS4Q9BT78 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.17■□□□□ 0.66
COPS4Q9BT78 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
COPS4Q9BT78 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
COPS4Q9BT78 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
COPS4Q9BT78 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
COPS4Q9BT78 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
COPS4Q9BT78 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.16■□□□□ 0.66
COPS4Q9BT78 PCDHAC2-203ENST00000615316 3011 ntBASIC19.16■□□□□ 0.66
COPS4Q9BT78 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COPS4Q9BT78 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COPS4Q9BT78 AC006455.2-201ENST00000429931 906 ntBASIC19.16■□□□□ 0.66
COPS4Q9BT78 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.16■□□□□ 0.66
COPS4Q9BT78 AC099791.2-201ENST00000605725 427 ntBASIC19.16■□□□□ 0.66
COPS4Q9BT78 pRNA.6-201ENST00000610482 90 ntBASIC19.16■□□□□ 0.66
COPS4Q9BT78 pRNA.5-201ENST00000612139 90 ntBASIC19.16■□□□□ 0.66
COPS4Q9BT78 pRNA.11-201ENST00000618423 90 ntBASIC19.16■□□□□ 0.66
COPS4Q9BT78 pRNA.13-201ENST00000619112 90 ntBASIC19.16■□□□□ 0.66
COPS4Q9BT78 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COPS4Q9BT78 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
COPS4Q9BT78 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COPS4Q9BT78 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COPS4Q9BT78 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COPS4Q9BT78 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COPS4Q9BT78 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
COPS4Q9BT78 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COPS4Q9BT78 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.16■□□□□ 0.66
COPS4Q9BT78 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COPS4Q9BT78 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.15■□□□□ 0.66
COPS4Q9BT78 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COPS4Q9BT78 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.15■□□□□ 0.66
COPS4Q9BT78 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms