Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 OR7E47P-201ENST00000546390 1422 ntBASIC17.77■□□□□ 0.44
FOXC2Q99958 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
FOXC2Q99958 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC17.77■□□□□ 0.43
FOXC2Q99958 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
FOXC2Q99958 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.77■□□□□ 0.43
FOXC2Q99958 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
FOXC2Q99958 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXC2Q99958 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.76■□□□□ 0.43
FOXC2Q99958 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXC2Q99958 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC17.76■□□□□ 0.43
FOXC2Q99958 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXC2Q99958 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.76■□□□□ 0.43
FOXC2Q99958 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXC2Q99958 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
FOXC2Q99958 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXC2Q99958 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.76■□□□□ 0.43
FOXC2Q99958 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.76■□□□□ 0.43
FOXC2Q99958 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.76■□□□□ 0.43
FOXC2Q99958 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXC2Q99958 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXC2Q99958 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC17.75■□□□□ 0.43
FOXC2Q99958 KRT17P2-201ENST00000300992 1314 ntBASIC17.75■□□□□ 0.43
FOXC2Q99958 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXC2Q99958 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC17.75■□□□□ 0.43
FOXC2Q99958 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXC2Q99958 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXC2Q99958 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXC2Q99958 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.75■□□□□ 0.43
FOXC2Q99958 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.75■□□□□ 0.43
FOXC2Q99958 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.75■□□□□ 0.43
FOXC2Q99958 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXC2Q99958 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.75■□□□□ 0.43
FOXC2Q99958 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
FOXC2Q99958 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXC2Q99958 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXC2Q99958 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
FOXC2Q99958 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
FOXC2Q99958 AL139125.2-201ENST00000623134 1869 ntBASIC17.75■□□□□ 0.43
FOXC2Q99958 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXC2Q99958 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXC2Q99958 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXC2Q99958 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXC2Q99958 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXC2Q99958 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXC2Q99958 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
FOXC2Q99958 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
FOXC2Q99958 AC012618.2-201ENST00000428058 849 ntBASIC17.74■□□□□ 0.43
FOXC2Q99958 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.74■□□□□ 0.43
FOXC2Q99958 PNMA6B-201ENST00000538162 1200 ntBASIC17.74■□□□□ 0.43
FOXC2Q99958 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.74■□□□□ 0.43
FOXC2Q99958 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
FOXC2Q99958 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXC2Q99958 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXC2Q99958 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
FOXC2Q99958 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
FOXC2Q99958 KRT17P1-201ENST00000399211 1546 ntBASIC17.73■□□□□ 0.43
FOXC2Q99958 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
FOXC2Q99958 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
FOXC2Q99958 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
FOXC2Q99958 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
FOXC2Q99958 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
FOXC2Q99958 AC100791.3-201ENST00000617619 330 ntBASIC17.73■□□□□ 0.43
FOXC2Q99958 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
FOXC2Q99958 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
FOXC2Q99958 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
FOXC2Q99958 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
FOXC2Q99958 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
FOXC2Q99958 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXC2Q99958 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
FOXC2Q99958 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXC2Q99958 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
FOXC2Q99958 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXC2Q99958 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.72■□□□□ 0.43
FOXC2Q99958 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
FOXC2Q99958 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXC2Q99958 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXC2Q99958 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
FOXC2Q99958 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXC2Q99958 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
FOXC2Q99958 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.72■□□□□ 0.43
FOXC2Q99958 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.72■□□□□ 0.43
FOXC2Q99958 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.72■□□□□ 0.43
FOXC2Q99958 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
FOXC2Q99958 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.72■□□□□ 0.43
FOXC2Q99958 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
FOXC2Q99958 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
FOXC2Q99958 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC17.71■□□□□ 0.43
FOXC2Q99958 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FOXC2Q99958 AC142381.3-201ENST00000568208 1670 ntBASIC17.71■□□□□ 0.43
FOXC2Q99958 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FOXC2Q99958 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.71■□□□□ 0.43
FOXC2Q99958 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FOXC2Q99958 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.71■□□□□ 0.43
FOXC2Q99958 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
FOXC2Q99958 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
FOXC2Q99958 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.71■□□□□ 0.43
FOXC2Q99958 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.71■□□□□ 0.43
FOXC2Q99958 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
FOXC2Q99958 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC17.71■□□□□ 0.43
FOXC2Q99958 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms