Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.5■□□□□ 0.87
NPAS2Q99743 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NPAS2Q99743 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NPAS2Q99743 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NPAS2Q99743 AL121603.2-201ENST00000557373 2117 ntBASIC20.5■□□□□ 0.87
NPAS2Q99743 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NPAS2Q99743 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NPAS2Q99743 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.49■□□□□ 0.87
NPAS2Q99743 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.49■□□□□ 0.87
NPAS2Q99743 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.49■□□□□ 0.87
NPAS2Q99743 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
NPAS2Q99743 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NPAS2Q99743 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.49■□□□□ 0.87
NPAS2Q99743 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NPAS2Q99743 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.49■□□□□ 0.87
NPAS2Q99743 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.49■□□□□ 0.87
NPAS2Q99743 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
NPAS2Q99743 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.49■□□□□ 0.87
NPAS2Q99743 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.49■□□□□ 0.87
NPAS2Q99743 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
NPAS2Q99743 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
NPAS2Q99743 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NPAS2Q99743 TSPY26P-201ENST00000476365 1326 ntBASIC20.49■□□□□ 0.87
NPAS2Q99743 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.49■□□□□ 0.87
NPAS2Q99743 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NPAS2Q99743 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NPAS2Q99743 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
NPAS2Q99743 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.48■□□□□ 0.87
NPAS2Q99743 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
NPAS2Q99743 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NPAS2Q99743 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NPAS2Q99743 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.48■□□□□ 0.87
NPAS2Q99743 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.48■□□□□ 0.87
NPAS2Q99743 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.48■□□□□ 0.87
NPAS2Q99743 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.48■□□□□ 0.87
NPAS2Q99743 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NPAS2Q99743 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
NPAS2Q99743 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NPAS2Q99743 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NPAS2Q99743 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
NPAS2Q99743 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
NPAS2Q99743 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.48■□□□□ 0.87
NPAS2Q99743 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NPAS2Q99743 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.47■□□□□ 0.87
NPAS2Q99743 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NPAS2Q99743 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.47■□□□□ 0.87
NPAS2Q99743 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
NPAS2Q99743 AL031602.1-201ENST00000633169 911 ntBASIC20.47■□□□□ 0.87
NPAS2Q99743 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NPAS2Q99743 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NPAS2Q99743 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.47■□□□□ 0.87
NPAS2Q99743 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NPAS2Q99743 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.46■□□□□ 0.87
NPAS2Q99743 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NPAS2Q99743 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NPAS2Q99743 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
NPAS2Q99743 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NPAS2Q99743 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.46■□□□□ 0.87
NPAS2Q99743 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NPAS2Q99743 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
NPAS2Q99743 MIR6821-201ENST00000617625 74 ntBASIC20.46■□□□□ 0.87
NPAS2Q99743 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.46■□□□□ 0.87
NPAS2Q99743 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NPAS2Q99743 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NPAS2Q99743 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
NPAS2Q99743 OR7E47P-201ENST00000546390 1422 ntBASIC20.45■□□□□ 0.86
NPAS2Q99743 FEM1AP1-201ENST00000431297 1995 ntBASIC20.45■□□□□ 0.86
NPAS2Q99743 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.45■□□□□ 0.86
NPAS2Q99743 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.45■□□□□ 0.86
NPAS2Q99743 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
NPAS2Q99743 AC097381.1-201ENST00000429019 1296 ntBASIC20.45■□□□□ 0.86
NPAS2Q99743 IGHV3-19-201ENST00000521488 291 ntBASIC20.45■□□□□ 0.86
NPAS2Q99743 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.45■□□□□ 0.86
NPAS2Q99743 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NPAS2Q99743 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
NPAS2Q99743 AC087623.3-201ENST00000607047 1098 ntBASIC20.45■□□□□ 0.86
NPAS2Q99743 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
NPAS2Q99743 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
NPAS2Q99743 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.45■□□□□ 0.86
NPAS2Q99743 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NPAS2Q99743 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
NPAS2Q99743 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.44■□□□□ 0.86
NPAS2Q99743 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NPAS2Q99743 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NPAS2Q99743 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NPAS2Q99743 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
NPAS2Q99743 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NPAS2Q99743 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NPAS2Q99743 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
NPAS2Q99743 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
NPAS2Q99743 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.44■□□□□ 0.86
NPAS2Q99743 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.44■□□□□ 0.86
NPAS2Q99743 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
NPAS2Q99743 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.44■□□□□ 0.86
NPAS2Q99743 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
NPAS2Q99743 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
NPAS2Q99743 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NPAS2Q99743 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NPAS2Q99743 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NPAS2Q99743 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms