Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
MS4A4EQ96PG1 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MS4A4EQ96PG1 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MS4A4EQ96PG1 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MS4A4EQ96PG1 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.61■□□□□ 0.73
MS4A4EQ96PG1 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MS4A4EQ96PG1 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MS4A4EQ96PG1 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
MS4A4EQ96PG1 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MS4A4EQ96PG1 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
MS4A4EQ96PG1 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.61■□□□□ 0.73
MS4A4EQ96PG1 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
MS4A4EQ96PG1 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MS4A4EQ96PG1 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MS4A4EQ96PG1 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
MS4A4EQ96PG1 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MS4A4EQ96PG1 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MS4A4EQ96PG1 AL049796.1-201ENST00000565336 1766 ntBASIC19.6■□□□□ 0.73
MS4A4EQ96PG1 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
MS4A4EQ96PG1 YBX1P1-201ENST00000445822 960 ntBASIC19.6■□□□□ 0.73
MS4A4EQ96PG1 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MS4A4EQ96PG1 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.6■□□□□ 0.73
MS4A4EQ96PG1 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.6■□□□□ 0.73
MS4A4EQ96PG1 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
MS4A4EQ96PG1 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MS4A4EQ96PG1 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
MS4A4EQ96PG1 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.59■□□□□ 0.73
MS4A4EQ96PG1 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
MS4A4EQ96PG1 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MS4A4EQ96PG1 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MS4A4EQ96PG1 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MS4A4EQ96PG1 AC123595.1-201ENST00000440769 1046 ntBASIC19.59■□□□□ 0.73
MS4A4EQ96PG1 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MS4A4EQ96PG1 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MS4A4EQ96PG1 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.59■□□□□ 0.73
MS4A4EQ96PG1 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
MS4A4EQ96PG1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.59■□□□□ 0.73
MS4A4EQ96PG1 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.58■□□□□ 0.73
MS4A4EQ96PG1 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
MS4A4EQ96PG1 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
MS4A4EQ96PG1 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
MS4A4EQ96PG1 ZNRF2P3-201ENST00000424200 374 ntBASIC19.58■□□□□ 0.72
MS4A4EQ96PG1 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
MS4A4EQ96PG1 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
MS4A4EQ96PG1 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
MS4A4EQ96PG1 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
MS4A4EQ96PG1 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.58■□□□□ 0.72
MS4A4EQ96PG1 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
MS4A4EQ96PG1 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
MS4A4EQ96PG1 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
MS4A4EQ96PG1 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.57■□□□□ 0.72
MS4A4EQ96PG1 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MS4A4EQ96PG1 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.57■□□□□ 0.72
MS4A4EQ96PG1 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
MS4A4EQ96PG1 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MS4A4EQ96PG1 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MS4A4EQ96PG1 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.57■□□□□ 0.72
MS4A4EQ96PG1 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.57■□□□□ 0.72
MS4A4EQ96PG1 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.57■□□□□ 0.72
MS4A4EQ96PG1 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
MS4A4EQ96PG1 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
MS4A4EQ96PG1 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
MS4A4EQ96PG1 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MS4A4EQ96PG1 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.57■□□□□ 0.72
MS4A4EQ96PG1 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MS4A4EQ96PG1 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MS4A4EQ96PG1 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.56■□□□□ 0.72
MS4A4EQ96PG1 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MS4A4EQ96PG1 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.56■□□□□ 0.72
MS4A4EQ96PG1 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MS4A4EQ96PG1 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
MS4A4EQ96PG1 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MS4A4EQ96PG1 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.56■□□□□ 0.72
MS4A4EQ96PG1 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MS4A4EQ96PG1 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MS4A4EQ96PG1 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.56■□□□□ 0.72
MS4A4EQ96PG1 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.56■□□□□ 0.72
MS4A4EQ96PG1 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MS4A4EQ96PG1 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MS4A4EQ96PG1 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MS4A4EQ96PG1 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
MS4A4EQ96PG1 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.56■□□□□ 0.72
MS4A4EQ96PG1 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MS4A4EQ96PG1 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
MS4A4EQ96PG1 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.55■□□□□ 0.72
MS4A4EQ96PG1 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
MS4A4EQ96PG1 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.55■□□□□ 0.72
MS4A4EQ96PG1 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
MS4A4EQ96PG1 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.55■□□□□ 0.72
MS4A4EQ96PG1 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
MS4A4EQ96PG1 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.55■□□□□ 0.72
MS4A4EQ96PG1 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.55■□□□□ 0.72
MS4A4EQ96PG1 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.55■□□□□ 0.72
MS4A4EQ96PG1 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.55■□□□□ 0.72
MS4A4EQ96PG1 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
MS4A4EQ96PG1 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
MS4A4EQ96PG1 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
MS4A4EQ96PG1 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MS4A4EQ96PG1 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
MS4A4EQ96PG1 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms