Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CCDC138Q96M89 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC138Q96M89 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC138Q96M89 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.7■□□□□ 0.9
CCDC138Q96M89 TPRG1LP1-201ENST00000598702 760 ntBASIC20.7■□□□□ 0.9
CCDC138Q96M89 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CCDC138Q96M89 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC138Q96M89 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.7■□□□□ 0.9
CCDC138Q96M89 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CCDC138Q96M89 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC138Q96M89 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC138Q96M89 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC138Q96M89 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC138Q96M89 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC138Q96M89 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC138Q96M89 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC138Q96M89 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC138Q96M89 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC138Q96M89 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CCDC138Q96M89 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC138Q96M89 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC138Q96M89 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC138Q96M89 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC138Q96M89 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC138Q96M89 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.69■□□□□ 0.9
CCDC138Q96M89 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC138Q96M89 AC027612.3-201ENST00000413684 1047 ntBASIC20.69■□□□□ 0.9
CCDC138Q96M89 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC138Q96M89 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC138Q96M89 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC138Q96M89 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC138Q96M89 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC138Q96M89 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC138Q96M89 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC138Q96M89 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC138Q96M89 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC138Q96M89 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.68■□□□□ 0.9
CCDC138Q96M89 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC138Q96M89 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC138Q96M89 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC138Q96M89 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC138Q96M89 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC138Q96M89 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC138Q96M89 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC138Q96M89 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC138Q96M89 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.67■□□□□ 0.9
CCDC138Q96M89 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC138Q96M89 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
CCDC138Q96M89 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC138Q96M89 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC138Q96M89 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC138Q96M89 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC138Q96M89 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC138Q96M89 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.66■□□□□ 0.9
CCDC138Q96M89 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC138Q96M89 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC138Q96M89 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.66■□□□□ 0.9
CCDC138Q96M89 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.66■□□□□ 0.9
CCDC138Q96M89 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC138Q96M89 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC138Q96M89 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC138Q96M89 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC138Q96M89 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC138Q96M89 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC138Q96M89 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC138Q96M89 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC138Q96M89 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC138Q96M89 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC138Q96M89 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC138Q96M89 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC138Q96M89 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC138Q96M89 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC138Q96M89 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC138Q96M89 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC138Q96M89 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC138Q96M89 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC138Q96M89 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC138Q96M89 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC138Q96M89 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC138Q96M89 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC138Q96M89 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC138Q96M89 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CCDC138Q96M89 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC138Q96M89 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC138Q96M89 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CCDC138Q96M89 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.64■□□□□ 0.89
CCDC138Q96M89 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CCDC138Q96M89 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC138Q96M89 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC138Q96M89 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CCDC138Q96M89 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC138Q96M89 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC138Q96M89 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC138Q96M89 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CCDC138Q96M89 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC138Q96M89 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC138Q96M89 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC138Q96M89 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CCDC138Q96M89 LINC02228-203ENST00000641970 1355 ntBASIC20.63■□□□□ 0.89
CCDC138Q96M89 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms