Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 C1QBPP2-201ENST00000528754 825 ntBASIC17.94■□□□□ 0.46
SPG11Q96JI7 AC233263.1-201ENST00000578059 224 ntBASIC17.94■□□□□ 0.46
SPG11Q96JI7 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.94■□□□□ 0.46
SPG11Q96JI7 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SPG11Q96JI7 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
SPG11Q96JI7 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
SPG11Q96JI7 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC17.94■□□□□ 0.46
SPG11Q96JI7 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SPG11Q96JI7 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SPG11Q96JI7 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SPG11Q96JI7 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.94■□□□□ 0.46
SPG11Q96JI7 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.94■□□□□ 0.46
SPG11Q96JI7 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SPG11Q96JI7 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.94■□□□□ 0.46
SPG11Q96JI7 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SPG11Q96JI7 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.94■□□□□ 0.46
SPG11Q96JI7 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SPG11Q96JI7 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC17.94■□□□□ 0.46
SPG11Q96JI7 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SPG11Q96JI7 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.93■□□□□ 0.46
SPG11Q96JI7 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SPG11Q96JI7 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SPG11Q96JI7 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.93■□□□□ 0.46
SPG11Q96JI7 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.93■□□□□ 0.46
SPG11Q96JI7 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SPG11Q96JI7 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.93■□□□□ 0.46
SPG11Q96JI7 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SPG11Q96JI7 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SPG11Q96JI7 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SPG11Q96JI7 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SPG11Q96JI7 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
SPG11Q96JI7 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.93■□□□□ 0.46
SPG11Q96JI7 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.93■□□□□ 0.46
SPG11Q96JI7 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
SPG11Q96JI7 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.93■□□□□ 0.46
SPG11Q96JI7 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.93■□□□□ 0.46
SPG11Q96JI7 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
SPG11Q96JI7 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.92■□□□□ 0.46
SPG11Q96JI7 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
SPG11Q96JI7 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.92■□□□□ 0.46
SPG11Q96JI7 PNMA6B-201ENST00000538162 1200 ntBASIC17.92■□□□□ 0.46
SPG11Q96JI7 AC069544.1-201ENST00000609399 999 ntBASIC17.92■□□□□ 0.46
SPG11Q96JI7 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SPG11Q96JI7 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC17.92■□□□□ 0.46
SPG11Q96JI7 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
SPG11Q96JI7 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SPG11Q96JI7 AC008175.2-201ENST00000612840 297 ntBASIC17.92■□□□□ 0.46
SPG11Q96JI7 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SPG11Q96JI7 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
SPG11Q96JI7 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SPG11Q96JI7 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.92■□□□□ 0.46
SPG11Q96JI7 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SPG11Q96JI7 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.91■□□□□ 0.46
SPG11Q96JI7 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.91■□□□□ 0.46
SPG11Q96JI7 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.91■□□□□ 0.46
SPG11Q96JI7 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SPG11Q96JI7 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.91■□□□□ 0.46
SPG11Q96JI7 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SPG11Q96JI7 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SPG11Q96JI7 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.91■□□□□ 0.46
SPG11Q96JI7 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.91■□□□□ 0.46
SPG11Q96JI7 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.91■□□□□ 0.46
SPG11Q96JI7 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SPG11Q96JI7 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SPG11Q96JI7 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SPG11Q96JI7 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SPG11Q96JI7 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SPG11Q96JI7 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SPG11Q96JI7 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.9■□□□□ 0.46
SPG11Q96JI7 AC053503.5-201ENST00000601508 636 ntBASIC17.9■□□□□ 0.46
SPG11Q96JI7 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SPG11Q96JI7 AC243732.1-201ENST00000612648 864 ntBASIC17.9■□□□□ 0.46
SPG11Q96JI7 AC097493.4-201ENST00000641197 219 ntBASIC17.9■□□□□ 0.46
SPG11Q96JI7 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SPG11Q96JI7 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SPG11Q96JI7 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SPG11Q96JI7 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SPG11Q96JI7 LSM12P1-201ENST00000411836 588 ntBASIC17.9■□□□□ 0.46
SPG11Q96JI7 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.9■□□□□ 0.46
SPG11Q96JI7 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.9■□□□□ 0.46
SPG11Q96JI7 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.9■□□□□ 0.46
SPG11Q96JI7 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SPG11Q96JI7 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
SPG11Q96JI7 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SPG11Q96JI7 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SPG11Q96JI7 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SPG11Q96JI7 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SPG11Q96JI7 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SPG11Q96JI7 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.89■□□□□ 0.45
SPG11Q96JI7 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.89■□□□□ 0.45
SPG11Q96JI7 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.89■□□□□ 0.45
SPG11Q96JI7 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.89■□□□□ 0.45
SPG11Q96JI7 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.89■□□□□ 0.45
SPG11Q96JI7 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SPG11Q96JI7 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
SPG11Q96JI7 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SPG11Q96JI7 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SPG11Q96JI7 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SPG11Q96JI7 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SPG11Q96JI7 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms