Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.56■□□□□ 0.88
PDLIM5Q96HC4 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDLIM5Q96HC4 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.56■□□□□ 0.88
PDLIM5Q96HC4 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDLIM5Q96HC4 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDLIM5Q96HC4 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDLIM5Q96HC4 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.55■□□□□ 0.88
PDLIM5Q96HC4 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDLIM5Q96HC4 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDLIM5Q96HC4 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDLIM5Q96HC4 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDLIM5Q96HC4 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.55■□□□□ 0.88
PDLIM5Q96HC4 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PDLIM5Q96HC4 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.55■□□□□ 0.88
PDLIM5Q96HC4 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDLIM5Q96HC4 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDLIM5Q96HC4 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
PDLIM5Q96HC4 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDLIM5Q96HC4 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PDLIM5Q96HC4 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDLIM5Q96HC4 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
PDLIM5Q96HC4 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDLIM5Q96HC4 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.54■□□□□ 0.88
PDLIM5Q96HC4 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.54■□□□□ 0.88
PDLIM5Q96HC4 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.54■□□□□ 0.88
PDLIM5Q96HC4 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PDLIM5Q96HC4 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDLIM5Q96HC4 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
PDLIM5Q96HC4 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.54■□□□□ 0.88
PDLIM5Q96HC4 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.54■□□□□ 0.88
PDLIM5Q96HC4 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDLIM5Q96HC4 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PDLIM5Q96HC4 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDLIM5Q96HC4 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PDLIM5Q96HC4 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PDLIM5Q96HC4 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PDLIM5Q96HC4 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PDLIM5Q96HC4 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDLIM5Q96HC4 POU5F1P4-201ENST00000413175 1085 ntBASIC20.53■□□□□ 0.88
PDLIM5Q96HC4 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.53■□□□□ 0.88
PDLIM5Q96HC4 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.53■□□□□ 0.88
PDLIM5Q96HC4 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDLIM5Q96HC4 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PDLIM5Q96HC4 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDLIM5Q96HC4 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDLIM5Q96HC4 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDLIM5Q96HC4 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.52■□□□□ 0.88
PDLIM5Q96HC4 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDLIM5Q96HC4 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.52■□□□□ 0.88
PDLIM5Q96HC4 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PDLIM5Q96HC4 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
PDLIM5Q96HC4 AP004607.4-201ENST00000530158 1459 ntBASIC20.52■□□□□ 0.88
PDLIM5Q96HC4 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDLIM5Q96HC4 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PDLIM5Q96HC4 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDLIM5Q96HC4 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PDLIM5Q96HC4 YBX1P1-201ENST00000445822 960 ntBASIC20.52■□□□□ 0.88
PDLIM5Q96HC4 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.52■□□□□ 0.88
PDLIM5Q96HC4 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.52■□□□□ 0.88
PDLIM5Q96HC4 AC138907.5-202ENST00000569484 235 ntBASIC20.52■□□□□ 0.88
PDLIM5Q96HC4 TERF1P2-201ENST00000583350 1212 ntBASIC20.52■□□□□ 0.88
PDLIM5Q96HC4 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDLIM5Q96HC4 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.52■□□□□ 0.88
PDLIM5Q96HC4 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
PDLIM5Q96HC4 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.52■□□□□ 0.88
PDLIM5Q96HC4 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
PDLIM5Q96HC4 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PDLIM5Q96HC4 AC061975.6-201ENST00000579045 1553 ntBASIC20.51■□□□□ 0.87
PDLIM5Q96HC4 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.51■□□□□ 0.87
PDLIM5Q96HC4 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDLIM5Q96HC4 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDLIM5Q96HC4 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.51■□□□□ 0.87
PDLIM5Q96HC4 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDLIM5Q96HC4 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDLIM5Q96HC4 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PDLIM5Q96HC4 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.51■□□□□ 0.87
PDLIM5Q96HC4 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PDLIM5Q96HC4 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDLIM5Q96HC4 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDLIM5Q96HC4 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PDLIM5Q96HC4 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PDLIM5Q96HC4 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
PDLIM5Q96HC4 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
PDLIM5Q96HC4 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.5■□□□□ 0.87
PDLIM5Q96HC4 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.5■□□□□ 0.87
PDLIM5Q96HC4 AC008175.2-201ENST00000612840 297 ntBASIC20.5■□□□□ 0.87
PDLIM5Q96HC4 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.5■□□□□ 0.87
PDLIM5Q96HC4 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
PDLIM5Q96HC4 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.5■□□□□ 0.87
PDLIM5Q96HC4 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDLIM5Q96HC4 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDLIM5Q96HC4 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDLIM5Q96HC4 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PDLIM5Q96HC4 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDLIM5Q96HC4 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
PDLIM5Q96HC4 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDLIM5Q96HC4 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
PDLIM5Q96HC4 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PDLIM5Q96HC4 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
PDLIM5Q96HC4 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms