Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VMP1Q96GC9 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VMP1Q96GC9 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
VMP1Q96GC9 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
VMP1Q96GC9 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.03■□□□□ 0.8
VMP1Q96GC9 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.03■□□□□ 0.8
VMP1Q96GC9 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.03■□□□□ 0.8
VMP1Q96GC9 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.03■□□□□ 0.8
VMP1Q96GC9 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
VMP1Q96GC9 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.03■□□□□ 0.8
VMP1Q96GC9 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.03■□□□□ 0.8
VMP1Q96GC9 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.03■□□□□ 0.8
VMP1Q96GC9 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VMP1Q96GC9 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
VMP1Q96GC9 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
VMP1Q96GC9 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.03■□□□□ 0.8
VMP1Q96GC9 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
VMP1Q96GC9 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
VMP1Q96GC9 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VMP1Q96GC9 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.02■□□□□ 0.8
VMP1Q96GC9 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.02■□□□□ 0.8
VMP1Q96GC9 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
VMP1Q96GC9 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.02■□□□□ 0.8
VMP1Q96GC9 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VMP1Q96GC9 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VMP1Q96GC9 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.02■□□□□ 0.8
VMP1Q96GC9 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.02■□□□□ 0.8
VMP1Q96GC9 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.02■□□□□ 0.8
VMP1Q96GC9 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.02■□□□□ 0.8
VMP1Q96GC9 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.02■□□□□ 0.8
VMP1Q96GC9 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
VMP1Q96GC9 AP004607.7-201ENST00000527152 1677 ntBASIC20.02■□□□□ 0.8
VMP1Q96GC9 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VMP1Q96GC9 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
VMP1Q96GC9 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
VMP1Q96GC9 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VMP1Q96GC9 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.01■□□□□ 0.79
VMP1Q96GC9 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VMP1Q96GC9 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.01■□□□□ 0.79
VMP1Q96GC9 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
VMP1Q96GC9 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.01■□□□□ 0.79
VMP1Q96GC9 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
VMP1Q96GC9 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
VMP1Q96GC9 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.01■□□□□ 0.79
VMP1Q96GC9 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
VMP1Q96GC9 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
VMP1Q96GC9 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.01■□□□□ 0.79
VMP1Q96GC9 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
VMP1Q96GC9 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VMP1Q96GC9 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
VMP1Q96GC9 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VMP1Q96GC9 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
VMP1Q96GC9 AC005224.4-201ENST00000583262 1652 ntBASIC20■□□□□ 0.79
VMP1Q96GC9 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
VMP1Q96GC9 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VMP1Q96GC9 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VMP1Q96GC9 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
VMP1Q96GC9 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VMP1Q96GC9 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20■□□□□ 0.79
VMP1Q96GC9 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20■□□□□ 0.79
VMP1Q96GC9 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20■□□□□ 0.79
VMP1Q96GC9 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VMP1Q96GC9 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20■□□□□ 0.79
VMP1Q96GC9 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20■□□□□ 0.79
VMP1Q96GC9 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20■□□□□ 0.79
VMP1Q96GC9 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20■□□□□ 0.79
VMP1Q96GC9 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20■□□□□ 0.79
VMP1Q96GC9 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
VMP1Q96GC9 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20■□□□□ 0.79
VMP1Q96GC9 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VMP1Q96GC9 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VMP1Q96GC9 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20■□□□□ 0.79
VMP1Q96GC9 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
VMP1Q96GC9 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VMP1Q96GC9 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VMP1Q96GC9 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VMP1Q96GC9 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VMP1Q96GC9 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VMP1Q96GC9 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VMP1Q96GC9 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VMP1Q96GC9 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
VMP1Q96GC9 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.99■□□□□ 0.79
VMP1Q96GC9 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
VMP1Q96GC9 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
VMP1Q96GC9 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.99■□□□□ 0.79
VMP1Q96GC9 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.99■□□□□ 0.79
VMP1Q96GC9 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.99■□□□□ 0.79
VMP1Q96GC9 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.99■□□□□ 0.79
VMP1Q96GC9 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
VMP1Q96GC9 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VMP1Q96GC9 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
VMP1Q96GC9 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VMP1Q96GC9 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
VMP1Q96GC9 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
VMP1Q96GC9 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
VMP1Q96GC9 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
VMP1Q96GC9 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VMP1Q96GC9 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
VMP1Q96GC9 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VMP1Q96GC9 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms