Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
CPNE2Q96FN4 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CPNE2Q96FN4 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CPNE2Q96FN4 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.18■□□□□ 0.5
CPNE2Q96FN4 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CPNE2Q96FN4 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CPNE2Q96FN4 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.17■□□□□ 0.5
CPNE2Q96FN4 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CPNE2Q96FN4 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.17■□□□□ 0.5
CPNE2Q96FN4 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CPNE2Q96FN4 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
CPNE2Q96FN4 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CPNE2Q96FN4 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CPNE2Q96FN4 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CPNE2Q96FN4 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CPNE2Q96FN4 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.17■□□□□ 0.5
CPNE2Q96FN4 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CPNE2Q96FN4 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.17■□□□□ 0.5
CPNE2Q96FN4 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.17■□□□□ 0.5
CPNE2Q96FN4 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.17■□□□□ 0.5
CPNE2Q96FN4 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CPNE2Q96FN4 MIR4466-201ENST00000606121 54 ntBASIC18.17■□□□□ 0.5
CPNE2Q96FN4 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CPNE2Q96FN4 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CPNE2Q96FN4 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CPNE2Q96FN4 AP006587.3-201ENST00000525742 1516 ntBASIC18.17■□□□□ 0.5
CPNE2Q96FN4 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CPNE2Q96FN4 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CPNE2Q96FN4 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.17■□□□□ 0.5
CPNE2Q96FN4 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPNE2Q96FN4 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.16■□□□□ 0.5
CPNE2Q96FN4 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CPNE2Q96FN4 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.16■□□□□ 0.5
CPNE2Q96FN4 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.16■□□□□ 0.5
CPNE2Q96FN4 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPNE2Q96FN4 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPNE2Q96FN4 AC003102.1-202ENST00000563394 1796 ntBASIC18.16■□□□□ 0.5
CPNE2Q96FN4 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
CPNE2Q96FN4 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CPNE2Q96FN4 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CPNE2Q96FN4 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPNE2Q96FN4 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPNE2Q96FN4 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CPNE2Q96FN4 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPNE2Q96FN4 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CPNE2Q96FN4 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPNE2Q96FN4 BX842568.3-201ENST00000418104 571 ntBASIC18.15■□□□□ 0.5
CPNE2Q96FN4 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.15■□□□□ 0.5
CPNE2Q96FN4 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPNE2Q96FN4 AC131281.2-201ENST00000520478 145 ntBASIC18.15■□□□□ 0.5
CPNE2Q96FN4 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CPNE2Q96FN4 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
CPNE2Q96FN4 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.15■□□□□ 0.5
CPNE2Q96FN4 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.15■□□□□ 0.5
CPNE2Q96FN4 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.15■□□□□ 0.5
CPNE2Q96FN4 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.15■□□□□ 0.5
CPNE2Q96FN4 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.15■□□□□ 0.5
CPNE2Q96FN4 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CPNE2Q96FN4 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CPNE2Q96FN4 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.14■□□□□ 0.5
CPNE2Q96FN4 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CPNE2Q96FN4 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
CPNE2Q96FN4 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CPNE2Q96FN4 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CPNE2Q96FN4 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CPNE2Q96FN4 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.14■□□□□ 0.49
CPNE2Q96FN4 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CPNE2Q96FN4 AL391422.3-201ENST00000603791 2761 ntBASIC18.14■□□□□ 0.49
CPNE2Q96FN4 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CPNE2Q96FN4 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.14■□□□□ 0.49
CPNE2Q96FN4 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CPNE2Q96FN4 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.14■□□□□ 0.49
CPNE2Q96FN4 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.14■□□□□ 0.49
CPNE2Q96FN4 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CPNE2Q96FN4 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CPNE2Q96FN4 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CPNE2Q96FN4 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CPNE2Q96FN4 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CPNE2Q96FN4 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.13■□□□□ 0.49
CPNE2Q96FN4 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.13■□□□□ 0.49
CPNE2Q96FN4 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.13■□□□□ 0.49
CPNE2Q96FN4 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPNE2Q96FN4 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPNE2Q96FN4 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPNE2Q96FN4 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPNE2Q96FN4 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPNE2Q96FN4 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.13■□□□□ 0.49
CPNE2Q96FN4 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.13■□□□□ 0.49
CPNE2Q96FN4 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.13■□□□□ 0.49
CPNE2Q96FN4 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.13■□□□□ 0.49
CPNE2Q96FN4 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPNE2Q96FN4 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPNE2Q96FN4 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.13■□□□□ 0.49
CPNE2Q96FN4 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPNE2Q96FN4 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CPNE2Q96FN4 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CPNE2Q96FN4 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPNE2Q96FN4 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CPNE2Q96FN4 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CPNE2Q96FN4 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms