Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.22■□□□□ 0.51
FOXRED1Q96CU9 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
FOXRED1Q96CU9 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
FOXRED1Q96CU9 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.22■□□□□ 0.51
FOXRED1Q96CU9 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
FOXRED1Q96CU9 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
FOXRED1Q96CU9 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
FOXRED1Q96CU9 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.22■□□□□ 0.51
FOXRED1Q96CU9 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
FOXRED1Q96CU9 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
FOXRED1Q96CU9 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
FOXRED1Q96CU9 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
FOXRED1Q96CU9 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.21■□□□□ 0.51
FOXRED1Q96CU9 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.21■□□□□ 0.51
FOXRED1Q96CU9 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
FOXRED1Q96CU9 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
FOXRED1Q96CU9 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
FOXRED1Q96CU9 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.21■□□□□ 0.51
FOXRED1Q96CU9 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.21■□□□□ 0.51
FOXRED1Q96CU9 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
FOXRED1Q96CU9 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
FOXRED1Q96CU9 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.21■□□□□ 0.51
FOXRED1Q96CU9 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
FOXRED1Q96CU9 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.21■□□□□ 0.51
FOXRED1Q96CU9 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.21■□□□□ 0.51
FOXRED1Q96CU9 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
FOXRED1Q96CU9 LINC01006-201ENST00000333319 2292 ntBASIC18.21■□□□□ 0.51
FOXRED1Q96CU9 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
FOXRED1Q96CU9 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
FOXRED1Q96CU9 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
FOXRED1Q96CU9 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.21■□□□□ 0.51
FOXRED1Q96CU9 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
FOXRED1Q96CU9 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
FOXRED1Q96CU9 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
FOXRED1Q96CU9 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
FOXRED1Q96CU9 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXRED1Q96CU9 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXRED1Q96CU9 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
FOXRED1Q96CU9 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
FOXRED1Q96CU9 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
FOXRED1Q96CU9 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
FOXRED1Q96CU9 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXRED1Q96CU9 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
FOXRED1Q96CU9 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.2■□□□□ 0.5
FOXRED1Q96CU9 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXRED1Q96CU9 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.2■□□□□ 0.5
FOXRED1Q96CU9 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.2■□□□□ 0.5
FOXRED1Q96CU9 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.2■□□□□ 0.5
FOXRED1Q96CU9 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.2■□□□□ 0.5
FOXRED1Q96CU9 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
FOXRED1Q96CU9 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
FOXRED1Q96CU9 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXRED1Q96CU9 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
FOXRED1Q96CU9 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
FOXRED1Q96CU9 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
FOXRED1Q96CU9 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FOXRED1Q96CU9 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.19■□□□□ 0.5
FOXRED1Q96CU9 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
FOXRED1Q96CU9 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.19■□□□□ 0.5
FOXRED1Q96CU9 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXRED1Q96CU9 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
FOXRED1Q96CU9 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXRED1Q96CU9 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXRED1Q96CU9 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.19■□□□□ 0.5
FOXRED1Q96CU9 AP005435.1-201ENST00000529293 1178 ntBASIC18.19■□□□□ 0.5
FOXRED1Q96CU9 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.19■□□□□ 0.5
FOXRED1Q96CU9 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.19■□□□□ 0.5
FOXRED1Q96CU9 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXRED1Q96CU9 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
FOXRED1Q96CU9 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FOXRED1Q96CU9 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXRED1Q96CU9 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.19■□□□□ 0.5
FOXRED1Q96CU9 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
FOXRED1Q96CU9 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXRED1Q96CU9 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXRED1Q96CU9 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXRED1Q96CU9 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.18■□□□□ 0.5
FOXRED1Q96CU9 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXRED1Q96CU9 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
FOXRED1Q96CU9 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXRED1Q96CU9 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
FOXRED1Q96CU9 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FOXRED1Q96CU9 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.18■□□□□ 0.5
FOXRED1Q96CU9 AL138724.1-201ENST00000606771 1088 ntBASIC18.18■□□□□ 0.5
FOXRED1Q96CU9 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.18■□□□□ 0.5
FOXRED1Q96CU9 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
FOXRED1Q96CU9 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXRED1Q96CU9 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXRED1Q96CU9 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FOXRED1Q96CU9 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
FOXRED1Q96CU9 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
FOXRED1Q96CU9 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FOXRED1Q96CU9 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
FOXRED1Q96CU9 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FOXRED1Q96CU9 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
FOXRED1Q96CU9 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
FOXRED1Q96CU9 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FOXRED1Q96CU9 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FOXRED1Q96CU9 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.17■□□□□ 0.5
FOXRED1Q96CU9 AC010525.1-201ENST00000585559 441 ntBASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms