Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 AC137767.1-201ENST00000602918 1920 ntBASIC21.23■□□□□ 0.99
CLDN23Q96B33 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN23Q96B33 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN23Q96B33 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN23Q96B33 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN23Q96B33 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN23Q96B33 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN23Q96B33 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN23Q96B33 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN23Q96B33 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN23Q96B33 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC21.22■□□□□ 0.99
CLDN23Q96B33 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN23Q96B33 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLDN23Q96B33 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLDN23Q96B33 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
CLDN23Q96B33 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLDN23Q96B33 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
CLDN23Q96B33 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLDN23Q96B33 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC21.21■□□□□ 0.99
CLDN23Q96B33 SNORA78-201ENST00000459373 127 ntBASIC21.21■□□□□ 0.99
CLDN23Q96B33 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLDN23Q96B33 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.21■□□□□ 0.99
CLDN23Q96B33 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
CLDN23Q96B33 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CLDN23Q96B33 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLDN23Q96B33 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CLDN23Q96B33 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CLDN23Q96B33 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLDN23Q96B33 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.21■□□□□ 0.99
CLDN23Q96B33 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.21■□□□□ 0.99
CLDN23Q96B33 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
CLDN23Q96B33 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLDN23Q96B33 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CLDN23Q96B33 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.2■□□□□ 0.98
CLDN23Q96B33 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLDN23Q96B33 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLDN23Q96B33 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLDN23Q96B33 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CLDN23Q96B33 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.2■□□□□ 0.98
CLDN23Q96B33 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.2■□□□□ 0.98
CLDN23Q96B33 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CLDN23Q96B33 MCRIP2P1-201ENST00000394346 511 ntBASIC21.2■□□□□ 0.98
CLDN23Q96B33 CDV3P1-201ENST00000471403 739 ntBASIC21.2■□□□□ 0.98
CLDN23Q96B33 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.2■□□□□ 0.98
CLDN23Q96B33 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.2■□□□□ 0.98
CLDN23Q96B33 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CLDN23Q96B33 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLDN23Q96B33 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLDN23Q96B33 AC092368.3-202ENST00000574180 1591 ntBASIC21.19■□□□□ 0.98
CLDN23Q96B33 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLDN23Q96B33 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC21.19■□□□□ 0.98
CLDN23Q96B33 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.19■□□□□ 0.98
CLDN23Q96B33 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
CLDN23Q96B33 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLDN23Q96B33 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLDN23Q96B33 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLDN23Q96B33 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLDN23Q96B33 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLDN23Q96B33 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CLDN23Q96B33 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CLDN23Q96B33 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLDN23Q96B33 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.18■□□□□ 0.98
CLDN23Q96B33 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CLDN23Q96B33 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLDN23Q96B33 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.18■□□□□ 0.98
CLDN23Q96B33 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.18■□□□□ 0.98
CLDN23Q96B33 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CLDN23Q96B33 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
CLDN23Q96B33 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.18■□□□□ 0.98
CLDN23Q96B33 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.18■□□□□ 0.98
CLDN23Q96B33 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.18■□□□□ 0.98
CLDN23Q96B33 AC233263.1-201ENST00000578059 224 ntBASIC21.18■□□□□ 0.98
CLDN23Q96B33 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC21.18■□□□□ 0.98
CLDN23Q96B33 LINC01023-201ENST00000606054 436 ntBASIC21.18■□□□□ 0.98
CLDN23Q96B33 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.18■□□□□ 0.98
CLDN23Q96B33 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
CLDN23Q96B33 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.18■□□□□ 0.98
CLDN23Q96B33 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.18■□□□□ 0.98
CLDN23Q96B33 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CLDN23Q96B33 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLDN23Q96B33 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CLDN23Q96B33 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.17■□□□□ 0.98
CLDN23Q96B33 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLDN23Q96B33 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLDN23Q96B33 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.17■□□□□ 0.98
CLDN23Q96B33 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.17■□□□□ 0.98
CLDN23Q96B33 AC069544.1-201ENST00000609399 999 ntBASIC21.17■□□□□ 0.98
CLDN23Q96B33 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC21.17■□□□□ 0.98
CLDN23Q96B33 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.17■□□□□ 0.98
CLDN23Q96B33 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.17■□□□□ 0.98
CLDN23Q96B33 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.17■□□□□ 0.98
CLDN23Q96B33 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.17■□□□□ 0.98
CLDN23Q96B33 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CLDN23Q96B33 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.17■□□□□ 0.98
CLDN23Q96B33 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLDN23Q96B33 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLDN23Q96B33 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.17■□□□□ 0.98
CLDN23Q96B33 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.17■□□□□ 0.98
CLDN23Q96B33 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CLDN23Q96B33 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms