Protein–RNA interactions for Protein: Q92542

NCSTN, Nicastrin, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTNQ92542 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.81■□□□□ 0.92
NCSTNQ92542 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NCSTNQ92542 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NCSTNQ92542 C11orf96-202ENST00000528572 1834 ntBASIC20.81■□□□□ 0.92
NCSTNQ92542 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
NCSTNQ92542 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.81■□□□□ 0.92
NCSTNQ92542 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NCSTNQ92542 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.81■□□□□ 0.92
NCSTNQ92542 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NCSTNQ92542 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
NCSTNQ92542 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NCSTNQ92542 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
NCSTNQ92542 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NCSTNQ92542 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
NCSTNQ92542 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.8■□□□□ 0.92
NCSTNQ92542 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.8■□□□□ 0.92
NCSTNQ92542 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NCSTNQ92542 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.8■□□□□ 0.92
NCSTNQ92542 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NCSTNQ92542 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NCSTNQ92542 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.8■□□□□ 0.92
NCSTNQ92542 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NCSTNQ92542 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.8■□□□□ 0.92
NCSTNQ92542 AC080038.1-201ENST00000611274 1154 ntBASIC20.8■□□□□ 0.92
NCSTNQ92542 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
NCSTNQ92542 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NCSTNQ92542 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.8■□□□□ 0.92
NCSTNQ92542 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NCSTNQ92542 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NCSTNQ92542 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
NCSTNQ92542 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NCSTNQ92542 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NCSTNQ92542 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NCSTNQ92542 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NCSTNQ92542 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.79■□□□□ 0.92
NCSTNQ92542 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NCSTNQ92542 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.79■□□□□ 0.92
NCSTNQ92542 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NCSTNQ92542 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.79■□□□□ 0.92
NCSTNQ92542 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.79■□□□□ 0.92
NCSTNQ92542 AP004607.7-201ENST00000527152 1677 ntBASIC20.79■□□□□ 0.92
NCSTNQ92542 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NCSTNQ92542 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NCSTNQ92542 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
NCSTNQ92542 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NCSTNQ92542 OR7E47P-201ENST00000546390 1422 ntBASIC20.78■□□□□ 0.92
NCSTNQ92542 ESRRAP2-201ENST00000418437 1549 ntBASIC20.78■□□□□ 0.92
NCSTNQ92542 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NCSTNQ92542 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
NCSTNQ92542 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
NCSTNQ92542 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.78■□□□□ 0.92
NCSTNQ92542 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NCSTNQ92542 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NCSTNQ92542 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NCSTNQ92542 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.77■□□□□ 0.92
NCSTNQ92542 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
NCSTNQ92542 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NCSTNQ92542 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.77■□□□□ 0.92
NCSTNQ92542 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
NCSTNQ92542 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NCSTNQ92542 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NCSTNQ92542 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
NCSTNQ92542 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.77■□□□□ 0.92
NCSTNQ92542 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.77■□□□□ 0.92
NCSTNQ92542 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NCSTNQ92542 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
NCSTNQ92542 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NCSTNQ92542 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NCSTNQ92542 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NCSTNQ92542 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
NCSTNQ92542 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
NCSTNQ92542 KRT87P-202ENST00000534226 1464 ntBASIC20.76■□□□□ 0.91
NCSTNQ92542 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
NCSTNQ92542 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.76■□□□□ 0.91
NCSTNQ92542 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NCSTNQ92542 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NCSTNQ92542 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NCSTNQ92542 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NCSTNQ92542 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NCSTNQ92542 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NCSTNQ92542 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
NCSTNQ92542 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
NCSTNQ92542 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NCSTNQ92542 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NCSTNQ92542 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.76■□□□□ 0.91
NCSTNQ92542 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NCSTNQ92542 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
NCSTNQ92542 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NCSTNQ92542 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NCSTNQ92542 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
NCSTNQ92542 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
NCSTNQ92542 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NCSTNQ92542 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.75■□□□□ 0.91
NCSTNQ92542 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NCSTNQ92542 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
NCSTNQ92542 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NCSTNQ92542 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NCSTNQ92542 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NCSTNQ92542 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NCSTNQ92542 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms