Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 CCDC92B-201ENST00000575506 885 ntBASIC22.45■■□□□ 1.18
SHC3Q92529 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
SHC3Q92529 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
SHC3Q92529 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC22.45■■□□□ 1.18
SHC3Q92529 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SHC3Q92529 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC22.45■■□□□ 1.18
SHC3Q92529 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
SHC3Q92529 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SHC3Q92529 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
SHC3Q92529 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SHC3Q92529 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SHC3Q92529 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC22.44■■□□□ 1.18
SHC3Q92529 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SHC3Q92529 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC22.44■■□□□ 1.18
SHC3Q92529 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SHC3Q92529 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SHC3Q92529 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC22.44■■□□□ 1.18
SHC3Q92529 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
SHC3Q92529 LGR4-203ENST00000480977 492 ntTSL 2 BASIC22.44■■□□□ 1.18
SHC3Q92529 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC22.44■■□□□ 1.18
SHC3Q92529 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SHC3Q92529 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC22.44■■□□□ 1.18
SHC3Q92529 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC22.44■■□□□ 1.18
SHC3Q92529 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC22.44■■□□□ 1.18
SHC3Q92529 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC22.44■■□□□ 1.18
SHC3Q92529 AC138907.5-202ENST00000569484 235 ntBASIC22.44■■□□□ 1.18
SHC3Q92529 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC22.44■■□□□ 1.18
SHC3Q92529 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
SHC3Q92529 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC22.44■■□□□ 1.18
SHC3Q92529 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SHC3Q92529 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SHC3Q92529 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC22.43■■□□□ 1.18
SHC3Q92529 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
SHC3Q92529 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
SHC3Q92529 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SHC3Q92529 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC22.43■■□□□ 1.18
SHC3Q92529 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SHC3Q92529 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SHC3Q92529 SERP1-208ENST00000491660 830 ntTSL 2 BASIC22.43■■□□□ 1.18
SHC3Q92529 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC22.43■■□□□ 1.18
SHC3Q92529 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SHC3Q92529 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
SHC3Q92529 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SHC3Q92529 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SHC3Q92529 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
SHC3Q92529 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SHC3Q92529 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
SHC3Q92529 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SHC3Q92529 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SHC3Q92529 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SHC3Q92529 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC22.42■■□□□ 1.18
SHC3Q92529 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC22.42■■□□□ 1.18
SHC3Q92529 KRT18P14-201ENST00000534205 1250 ntBASIC22.42■■□□□ 1.18
SHC3Q92529 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC22.42■■□□□ 1.18
SHC3Q92529 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
SHC3Q92529 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SHC3Q92529 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC22.42■■□□□ 1.18
SHC3Q92529 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SHC3Q92529 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
SHC3Q92529 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SHC3Q92529 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SHC3Q92529 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
SHC3Q92529 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SHC3Q92529 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC22.41■■□□□ 1.18
SHC3Q92529 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC22.41■■□□□ 1.18
SHC3Q92529 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC22.41■■□□□ 1.18
SHC3Q92529 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC22.41■■□□□ 1.18
SHC3Q92529 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SHC3Q92529 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
SHC3Q92529 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SHC3Q92529 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
SHC3Q92529 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC22.4■■□□□ 1.18
SHC3Q92529 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
SHC3Q92529 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC22.4■■□□□ 1.18
SHC3Q92529 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC22.4■■□□□ 1.18
SHC3Q92529 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
SHC3Q92529 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SHC3Q92529 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
SHC3Q92529 AC010141.2-201ENST00000452426 721 ntBASIC22.4■■□□□ 1.18
SHC3Q92529 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC22.4■■□□□ 1.18
SHC3Q92529 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC22.4■■□□□ 1.18
SHC3Q92529 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SHC3Q92529 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
SHC3Q92529 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC22.39■■□□□ 1.18
SHC3Q92529 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC22.39■■□□□ 1.18
SHC3Q92529 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
SHC3Q92529 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
SHC3Q92529 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC22.39■■□□□ 1.18
SHC3Q92529 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC22.39■■□□□ 1.18
SHC3Q92529 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC22.39■■□□□ 1.18
SHC3Q92529 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC22.39■■□□□ 1.18
SHC3Q92529 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC22.39■■□□□ 1.18
SHC3Q92529 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SHC3Q92529 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
SHC3Q92529 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SHC3Q92529 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC22.39■■□□□ 1.17
SHC3Q92529 POU5F1P4-201ENST00000413175 1085 ntBASIC22.39■■□□□ 1.17
SHC3Q92529 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC22.39■■□□□ 1.17
SHC3Q92529 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SHC3Q92529 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC22.39■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms