Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
SYNE2Q8WXH0 KRT17P6-201ENST00000453795 1220 ntBASIC8.71□□□□□ -1.02
SYNE2Q8WXH0 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC8.71□□□□□ -1.02
SYNE2Q8WXH0 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC8.7□□□□□ -1.02
SYNE2Q8WXH0 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC8.7□□□□□ -1.02
SYNE2Q8WXH0 LTBR-211ENST00000543190 785 ntTSL 3 BASIC8.7□□□□□ -1.02
SYNE2Q8WXH0 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
SYNE2Q8WXH0 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC8.7□□□□□ -1.02
SYNE2Q8WXH0 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC8.7□□□□□ -1.02
SYNE2Q8WXH0 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
SYNE2Q8WXH0 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC8.7□□□□□ -1.02
SYNE2Q8WXH0 AC027702.1-201ENST00000563810 1770 ntBASIC8.7□□□□□ -1.02
SYNE2Q8WXH0 AP004609.3-201ENST00000610705 1884 ntBASIC8.7□□□□□ -1.02
SYNE2Q8WXH0 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
SYNE2Q8WXH0 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
SYNE2Q8WXH0 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
SYNE2Q8WXH0 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
SYNE2Q8WXH0 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
SYNE2Q8WXH0 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
SYNE2Q8WXH0 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC8.7□□□□□ -1.02
SYNE2Q8WXH0 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
SYNE2Q8WXH0 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
SYNE2Q8WXH0 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
SYNE2Q8WXH0 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC8.7□□□□□ -1.02
SYNE2Q8WXH0 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
SYNE2Q8WXH0 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC8.7□□□□□ -1.02
SYNE2Q8WXH0 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
SYNE2Q8WXH0 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC8.7□□□□□ -1.02
SYNE2Q8WXH0 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC8.7□□□□□ -1.02
SYNE2Q8WXH0 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC8.7□□□□□ -1.02
SYNE2Q8WXH0 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
SYNE2Q8WXH0 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC8.7□□□□□ -1.02
SYNE2Q8WXH0 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC8.7□□□□□ -1.02
SYNE2Q8WXH0 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
SYNE2Q8WXH0 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC8.7□□□□□ -1.02
SYNE2Q8WXH0 AC133681.1-201ENST00000465482 601 ntBASIC8.7□□□□□ -1.02
SYNE2Q8WXH0 AL589743.5-201ENST00000616611 1050 ntBASIC8.7□□□□□ -1.02
SYNE2Q8WXH0 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
SYNE2Q8WXH0 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
SYNE2Q8WXH0 AC079598.2-202ENST00000546624 1451 ntBASIC8.7□□□□□ -1.02
SYNE2Q8WXH0 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC8.69□□□□□ -1.02
SYNE2Q8WXH0 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC8.69□□□□□ -1.02
SYNE2Q8WXH0 DBP-204ENST00000599385 709 ntTSL 3 BASIC8.69□□□□□ -1.02
SYNE2Q8WXH0 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC8.69□□□□□ -1.02
SYNE2Q8WXH0 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SYNE2Q8WXH0 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SYNE2Q8WXH0 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC8.69□□□□□ -1.02
SYNE2Q8WXH0 PCED1CP-201ENST00000419887 785 ntBASIC8.69□□□□□ -1.02
SYNE2Q8WXH0 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
SYNE2Q8WXH0 SDHD-206ENST00000528182 754 ntTSL 3 BASIC8.69□□□□□ -1.02
SYNE2Q8WXH0 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC8.69□□□□□ -1.02
SYNE2Q8WXH0 REXO1L10P-201ENST00000615707 1290 ntBASIC8.69□□□□□ -1.02
SYNE2Q8WXH0 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC8.69□□□□□ -1.02
SYNE2Q8WXH0 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SYNE2Q8WXH0 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SYNE2Q8WXH0 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC8.69□□□□□ -1.02
SYNE2Q8WXH0 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC8.69□□□□□ -1.02
SYNE2Q8WXH0 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC8.69□□□□□ -1.02
SYNE2Q8WXH0 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SYNE2Q8WXH0 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
SYNE2Q8WXH0 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SYNE2Q8WXH0 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
SYNE2Q8WXH0 AL359075.1-203ENST00000462729 1002 ntBASIC8.69□□□□□ -1.02
SYNE2Q8WXH0 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC8.69□□□□□ -1.02
SYNE2Q8WXH0 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SYNE2Q8WXH0 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SYNE2Q8WXH0 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
SYNE2Q8WXH0 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SYNE2Q8WXH0 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SYNE2Q8WXH0 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
SYNE2Q8WXH0 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
SYNE2Q8WXH0 RBM17P2-201ENST00000616397 1405 ntBASIC8.68□□□□□ -1.02
SYNE2Q8WXH0 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
SYNE2Q8WXH0 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC8.68□□□□□ -1.02
SYNE2Q8WXH0 AC004951.3-201ENST00000418645 1148 ntBASIC8.68□□□□□ -1.02
SYNE2Q8WXH0 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC8.68□□□□□ -1.02
SYNE2Q8WXH0 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC8.68□□□□□ -1.02
SYNE2Q8WXH0 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
SYNE2Q8WXH0 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC8.68□□□□□ -1.02
SYNE2Q8WXH0 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC8.68□□□□□ -1.02
SYNE2Q8WXH0 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC8.68□□□□□ -1.02
SYNE2Q8WXH0 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
SYNE2Q8WXH0 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
SYNE2Q8WXH0 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC8.68□□□□□ -1.02
SYNE2Q8WXH0 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
SYNE2Q8WXH0 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
SYNE2Q8WXH0 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC8.68□□□□□ -1.02
SYNE2Q8WXH0 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
SYNE2Q8WXH0 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
SYNE2Q8WXH0 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC8.68□□□□□ -1.02
SYNE2Q8WXH0 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
SYNE2Q8WXH0 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
SYNE2Q8WXH0 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
SYNE2Q8WXH0 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC8.68□□□□□ -1.02
SYNE2Q8WXH0 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC8.68□□□□□ -1.02
SYNE2Q8WXH0 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
SYNE2Q8WXH0 SRI-203ENST00000419179 1307 ntTSL 2 BASIC8.68□□□□□ -1.02
SYNE2Q8WXH0 TMEM202-AS1-202ENST00000565181 2325 ntBASIC8.68□□□□□ -1.02
SYNE2Q8WXH0 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC8.68□□□□□ -1.02
SYNE2Q8WXH0 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC8.68□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms