Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.65■□□□□ 0.42
RTN4IP1Q8WWV3 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.64■□□□□ 0.42
RTN4IP1Q8WWV3 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.64■□□□□ 0.41
RTN4IP1Q8WWV3 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTN4IP1Q8WWV3 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RTN4IP1Q8WWV3 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTN4IP1Q8WWV3 BX842568.3-201ENST00000418104 571 ntBASIC17.64■□□□□ 0.41
RTN4IP1Q8WWV3 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC17.64■□□□□ 0.41
RTN4IP1Q8WWV3 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC17.64■□□□□ 0.41
RTN4IP1Q8WWV3 AC106739.1-201ENST00000617035 715 ntBASIC17.64■□□□□ 0.41
RTN4IP1Q8WWV3 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTN4IP1Q8WWV3 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTN4IP1Q8WWV3 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC17.63■□□□□ 0.41
RTN4IP1Q8WWV3 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTN4IP1Q8WWV3 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.63■□□□□ 0.41
RTN4IP1Q8WWV3 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.63■□□□□ 0.41
RTN4IP1Q8WWV3 AC110285.6-201ENST00000617652 491 ntBASIC17.63■□□□□ 0.41
RTN4IP1Q8WWV3 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTN4IP1Q8WWV3 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
RTN4IP1Q8WWV3 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RTN4IP1Q8WWV3 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTN4IP1Q8WWV3 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTN4IP1Q8WWV3 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RTN4IP1Q8WWV3 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTN4IP1Q8WWV3 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RTN4IP1Q8WWV3 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTN4IP1Q8WWV3 NALT1-201ENST00000429224 738 ntTSL 5 BASIC17.62■□□□□ 0.41
RTN4IP1Q8WWV3 AC010141.3-201ENST00000456659 717 ntBASIC17.62■□□□□ 0.41
RTN4IP1Q8WWV3 AP005435.1-201ENST00000529293 1178 ntBASIC17.62■□□□□ 0.41
RTN4IP1Q8WWV3 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC17.62■□□□□ 0.41
RTN4IP1Q8WWV3 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTN4IP1Q8WWV3 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTN4IP1Q8WWV3 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTN4IP1Q8WWV3 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTN4IP1Q8WWV3 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
RTN4IP1Q8WWV3 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RTN4IP1Q8WWV3 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.62■□□□□ 0.41
RTN4IP1Q8WWV3 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC17.62■□□□□ 0.41
RTN4IP1Q8WWV3 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RTN4IP1Q8WWV3 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTN4IP1Q8WWV3 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RTN4IP1Q8WWV3 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.62■□□□□ 0.41
RTN4IP1Q8WWV3 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
RTN4IP1Q8WWV3 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
RTN4IP1Q8WWV3 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTN4IP1Q8WWV3 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTN4IP1Q8WWV3 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
RTN4IP1Q8WWV3 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTN4IP1Q8WWV3 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
RTN4IP1Q8WWV3 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC17.61■□□□□ 0.41
RTN4IP1Q8WWV3 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RTN4IP1Q8WWV3 AC233992.3-201ENST00000607491 485 ntBASIC17.61■□□□□ 0.41
RTN4IP1Q8WWV3 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC17.61■□□□□ 0.41
RTN4IP1Q8WWV3 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTN4IP1Q8WWV3 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RTN4IP1Q8WWV3 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTN4IP1Q8WWV3 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
RTN4IP1Q8WWV3 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.61■□□□□ 0.41
RTN4IP1Q8WWV3 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RTN4IP1Q8WWV3 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
RTN4IP1Q8WWV3 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RTN4IP1Q8WWV3 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC17.61■□□□□ 0.41
RTN4IP1Q8WWV3 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RTN4IP1Q8WWV3 FEM1AP1-201ENST00000431297 1995 ntBASIC17.6■□□□□ 0.41
RTN4IP1Q8WWV3 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTN4IP1Q8WWV3 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RTN4IP1Q8WWV3 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTN4IP1Q8WWV3 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.6■□□□□ 0.41
RTN4IP1Q8WWV3 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.6■□□□□ 0.41
RTN4IP1Q8WWV3 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTN4IP1Q8WWV3 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTN4IP1Q8WWV3 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
RTN4IP1Q8WWV3 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.6■□□□□ 0.41
RTN4IP1Q8WWV3 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC17.6■□□□□ 0.41
RTN4IP1Q8WWV3 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RTN4IP1Q8WWV3 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC17.6■□□□□ 0.41
RTN4IP1Q8WWV3 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC17.6■□□□□ 0.41
RTN4IP1Q8WWV3 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
RTN4IP1Q8WWV3 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RTN4IP1Q8WWV3 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
RTN4IP1Q8WWV3 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.6■□□□□ 0.41
RTN4IP1Q8WWV3 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
RTN4IP1Q8WWV3 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RTN4IP1Q8WWV3 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTN4IP1Q8WWV3 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RTN4IP1Q8WWV3 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTN4IP1Q8WWV3 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RTN4IP1Q8WWV3 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RTN4IP1Q8WWV3 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTN4IP1Q8WWV3 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTN4IP1Q8WWV3 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTN4IP1Q8WWV3 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTN4IP1Q8WWV3 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTN4IP1Q8WWV3 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTN4IP1Q8WWV3 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTN4IP1Q8WWV3 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTN4IP1Q8WWV3 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.59■□□□□ 0.41
RTN4IP1Q8WWV3 EDA-201ENST00000338901 1233 ntBASIC17.59■□□□□ 0.41
RTN4IP1Q8WWV3 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17.59■□□□□ 0.41
RTN4IP1Q8WWV3 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms