Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMIM4Q8WVI0 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMIM4Q8WVI0 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
SMIM4Q8WVI0 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SMIM4Q8WVI0 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
SMIM4Q8WVI0 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMIM4Q8WVI0 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMIM4Q8WVI0 SMG8-203ENST00000578922 2178 ntBASIC17.97■□□□□ 0.47
SMIM4Q8WVI0 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMIM4Q8WVI0 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMIM4Q8WVI0 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC17.97■□□□□ 0.47
SMIM4Q8WVI0 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SMIM4Q8WVI0 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC17.97■□□□□ 0.47
SMIM4Q8WVI0 CLTA-210ENST00000540080 989 ntTSL 2 BASIC17.97■□□□□ 0.47
SMIM4Q8WVI0 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SMIM4Q8WVI0 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.97■□□□□ 0.47
SMIM4Q8WVI0 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMIM4Q8WVI0 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMIM4Q8WVI0 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMIM4Q8WVI0 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMIM4Q8WVI0 AC003102.1-202ENST00000563394 1796 ntBASIC17.96■□□□□ 0.47
SMIM4Q8WVI0 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.96■□□□□ 0.47
SMIM4Q8WVI0 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMIM4Q8WVI0 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMIM4Q8WVI0 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.96■□□□□ 0.47
SMIM4Q8WVI0 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
SMIM4Q8WVI0 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMIM4Q8WVI0 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMIM4Q8WVI0 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMIM4Q8WVI0 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.96■□□□□ 0.47
SMIM4Q8WVI0 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.96■□□□□ 0.47
SMIM4Q8WVI0 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.96■□□□□ 0.47
SMIM4Q8WVI0 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMIM4Q8WVI0 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMIM4Q8WVI0 BEX3-202ENST00000372634 753 ntTSL 2 BASIC17.96■□□□□ 0.47
SMIM4Q8WVI0 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC17.96■□□□□ 0.47
SMIM4Q8WVI0 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC17.96■□□□□ 0.47
SMIM4Q8WVI0 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.96■□□□□ 0.47
SMIM4Q8WVI0 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMIM4Q8WVI0 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMIM4Q8WVI0 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SMIM4Q8WVI0 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.95■□□□□ 0.46
SMIM4Q8WVI0 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMIM4Q8WVI0 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMIM4Q8WVI0 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SMIM4Q8WVI0 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMIM4Q8WVI0 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SMIM4Q8WVI0 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SMIM4Q8WVI0 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SMIM4Q8WVI0 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
SMIM4Q8WVI0 AL162377.1-201ENST00000618844 1793 ntBASIC17.95■□□□□ 0.46
SMIM4Q8WVI0 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMIM4Q8WVI0 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMIM4Q8WVI0 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMIM4Q8WVI0 RARRES2P2-201ENST00000394842 485 ntBASIC17.95■□□□□ 0.46
SMIM4Q8WVI0 CLTA-206ENST00000466396 695 ntTSL 2 BASIC17.95■□□□□ 0.46
SMIM4Q8WVI0 AC137630.3-201ENST00000607245 391 ntBASIC17.95■□□□□ 0.46
SMIM4Q8WVI0 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SMIM4Q8WVI0 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.95■□□□□ 0.46
SMIM4Q8WVI0 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMIM4Q8WVI0 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMIM4Q8WVI0 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMIM4Q8WVI0 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMIM4Q8WVI0 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.95■□□□□ 0.46
SMIM4Q8WVI0 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
SMIM4Q8WVI0 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMIM4Q8WVI0 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SMIM4Q8WVI0 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
SMIM4Q8WVI0 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMIM4Q8WVI0 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMIM4Q8WVI0 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SMIM4Q8WVI0 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC17.94■□□□□ 0.46
SMIM4Q8WVI0 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC17.94■□□□□ 0.46
SMIM4Q8WVI0 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SMIM4Q8WVI0 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
SMIM4Q8WVI0 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.94■□□□□ 0.46
SMIM4Q8WVI0 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMIM4Q8WVI0 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMIM4Q8WVI0 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SMIM4Q8WVI0 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SMIM4Q8WVI0 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.93■□□□□ 0.46
SMIM4Q8WVI0 AC112907.3-201ENST00000577781 2400 ntBASIC17.93■□□□□ 0.46
SMIM4Q8WVI0 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMIM4Q8WVI0 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC17.93■□□□□ 0.46
SMIM4Q8WVI0 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.93■□□□□ 0.46
SMIM4Q8WVI0 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.93■□□□□ 0.46
SMIM4Q8WVI0 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMIM4Q8WVI0 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMIM4Q8WVI0 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC17.93■□□□□ 0.46
SMIM4Q8WVI0 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMIM4Q8WVI0 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMIM4Q8WVI0 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMIM4Q8WVI0 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMIM4Q8WVI0 AC007225.1-201ENST00000566331 1836 ntBASIC17.93■□□□□ 0.46
SMIM4Q8WVI0 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMIM4Q8WVI0 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SMIM4Q8WVI0 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMIM4Q8WVI0 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.92■□□□□ 0.46
SMIM4Q8WVI0 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
SMIM4Q8WVI0 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms