Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
CHD6Q8TD26 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CHD6Q8TD26 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CHD6Q8TD26 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHD6Q8TD26 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.33■□□□□ 0.69
CHD6Q8TD26 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHD6Q8TD26 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHD6Q8TD26 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.33■□□□□ 0.68
CHD6Q8TD26 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.33■□□□□ 0.68
CHD6Q8TD26 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CHD6Q8TD26 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.33■□□□□ 0.68
CHD6Q8TD26 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC19.33■□□□□ 0.68
CHD6Q8TD26 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC19.33■□□□□ 0.68
CHD6Q8TD26 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.32■□□□□ 0.68
CHD6Q8TD26 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.32■□□□□ 0.68
CHD6Q8TD26 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
CHD6Q8TD26 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.32■□□□□ 0.68
CHD6Q8TD26 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.32■□□□□ 0.68
CHD6Q8TD26 AC092803.2-201ENST00000564287 1899 ntBASIC19.32■□□□□ 0.68
CHD6Q8TD26 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHD6Q8TD26 RBM17P1-201ENST00000453646 1190 ntBASIC19.32■□□□□ 0.68
CHD6Q8TD26 AC139530.3-201ENST00000620344 690 ntBASIC19.32■□□□□ 0.68
CHD6Q8TD26 AC010947.1-201ENST00000623454 693 ntBASIC19.32■□□□□ 0.68
CHD6Q8TD26 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CHD6Q8TD26 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHD6Q8TD26 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.31■□□□□ 0.68
CHD6Q8TD26 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CHD6Q8TD26 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.31■□□□□ 0.68
CHD6Q8TD26 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.31■□□□□ 0.68
CHD6Q8TD26 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHD6Q8TD26 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.31■□□□□ 0.68
CHD6Q8TD26 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CHD6Q8TD26 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHD6Q8TD26 ST7-202ENST00000323984 2142 ntTSL 5 BASIC19.31■□□□□ 0.68
CHD6Q8TD26 ST7-207ENST00000393449 2127 ntTSL 5 BASIC19.31■□□□□ 0.68
CHD6Q8TD26 AC010501.1-201ENST00000606270 1962 ntBASIC19.31■□□□□ 0.68
CHD6Q8TD26 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.31■□□□□ 0.68
CHD6Q8TD26 AC006011.2-201ENST00000621313 1158 ntBASIC19.31■□□□□ 0.68
CHD6Q8TD26 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CHD6Q8TD26 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHD6Q8TD26 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHD6Q8TD26 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
CHD6Q8TD26 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CHD6Q8TD26 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.3■□□□□ 0.68
CHD6Q8TD26 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.3■□□□□ 0.68
CHD6Q8TD26 AC246785.2-201ENST00000432512 513 ntBASIC19.3■□□□□ 0.68
CHD6Q8TD26 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
CHD6Q8TD26 CYP2D8P-201ENST00000433633 1490 ntBASIC19.3■□□□□ 0.68
CHD6Q8TD26 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHD6Q8TD26 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHD6Q8TD26 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHD6Q8TD26 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.3■□□□□ 0.68
CHD6Q8TD26 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.3■□□□□ 0.68
CHD6Q8TD26 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.3■□□□□ 0.68
CHD6Q8TD26 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.3■□□□□ 0.68
CHD6Q8TD26 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHD6Q8TD26 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.29■□□□□ 0.68
CHD6Q8TD26 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHD6Q8TD26 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.29■□□□□ 0.68
CHD6Q8TD26 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.29■□□□□ 0.68
CHD6Q8TD26 AL691432.3-201ENST00000621860 400 ntBASIC19.29■□□□□ 0.68
CHD6Q8TD26 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.29■□□□□ 0.68
CHD6Q8TD26 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHD6Q8TD26 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.29■□□□□ 0.68
CHD6Q8TD26 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CHD6Q8TD26 AL589743.5-201ENST00000616611 1050 ntBASIC19.29■□□□□ 0.68
CHD6Q8TD26 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.29■□□□□ 0.68
CHD6Q8TD26 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.28■□□□□ 0.68
CHD6Q8TD26 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHD6Q8TD26 AL355355.2-201ENST00000442321 338 ntBASIC19.28■□□□□ 0.68
CHD6Q8TD26 HCG4P8-203ENST00000443049 980 ntBASIC19.28■□□□□ 0.68
CHD6Q8TD26 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHD6Q8TD26 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.28■□□□□ 0.68
CHD6Q8TD26 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.28■□□□□ 0.68
CHD6Q8TD26 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CHD6Q8TD26 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHD6Q8TD26 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.28■□□□□ 0.68
CHD6Q8TD26 KRT8P10-201ENST00000450021 1447 ntBASIC19.28■□□□□ 0.68
CHD6Q8TD26 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHD6Q8TD26 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHD6Q8TD26 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHD6Q8TD26 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC19.28■□□□□ 0.68
CHD6Q8TD26 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHD6Q8TD26 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHD6Q8TD26 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.28■□□□□ 0.68
CHD6Q8TD26 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.28■□□□□ 0.68
CHD6Q8TD26 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.27■□□□□ 0.68
CHD6Q8TD26 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.27■□□□□ 0.68
CHD6Q8TD26 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.27■□□□□ 0.68
CHD6Q8TD26 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHD6Q8TD26 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHD6Q8TD26 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHD6Q8TD26 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CHD6Q8TD26 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHD6Q8TD26 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC19.27■□□□□ 0.68
CHD6Q8TD26 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHD6Q8TD26 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CHD6Q8TD26 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CHD6Q8TD26 AL031133.1-201ENST00000406807 723 ntBASIC19.27■□□□□ 0.67
CHD6Q8TD26 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.27■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms