Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.89■□□□□ 0.93
RAB3IL1Q8TBN0 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAB3IL1Q8TBN0 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.89■□□□□ 0.93
RAB3IL1Q8TBN0 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAB3IL1Q8TBN0 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
RAB3IL1Q8TBN0 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RAB3IL1Q8TBN0 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.89■□□□□ 0.93
RAB3IL1Q8TBN0 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.89■□□□□ 0.93
RAB3IL1Q8TBN0 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.89■□□□□ 0.93
RAB3IL1Q8TBN0 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAB3IL1Q8TBN0 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAB3IL1Q8TBN0 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAB3IL1Q8TBN0 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAB3IL1Q8TBN0 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAB3IL1Q8TBN0 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAB3IL1Q8TBN0 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAB3IL1Q8TBN0 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAB3IL1Q8TBN0 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
RAB3IL1Q8TBN0 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RAB3IL1Q8TBN0 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
RAB3IL1Q8TBN0 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAB3IL1Q8TBN0 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RAB3IL1Q8TBN0 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAB3IL1Q8TBN0 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAB3IL1Q8TBN0 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAB3IL1Q8TBN0 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAB3IL1Q8TBN0 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAB3IL1Q8TBN0 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAB3IL1Q8TBN0 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RAB3IL1Q8TBN0 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAB3IL1Q8TBN0 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.87■□□□□ 0.93
RAB3IL1Q8TBN0 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAB3IL1Q8TBN0 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAB3IL1Q8TBN0 AP005212.1-201ENST00000581547 1997 ntBASIC20.87■□□□□ 0.93
RAB3IL1Q8TBN0 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
RAB3IL1Q8TBN0 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
RAB3IL1Q8TBN0 AC010141.3-201ENST00000456659 717 ntBASIC20.87■□□□□ 0.93
RAB3IL1Q8TBN0 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.87■□□□□ 0.93
RAB3IL1Q8TBN0 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
RAB3IL1Q8TBN0 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAB3IL1Q8TBN0 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
RAB3IL1Q8TBN0 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
RAB3IL1Q8TBN0 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RAB3IL1Q8TBN0 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RAB3IL1Q8TBN0 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAB3IL1Q8TBN0 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.87■□□□□ 0.93
RAB3IL1Q8TBN0 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAB3IL1Q8TBN0 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
RAB3IL1Q8TBN0 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAB3IL1Q8TBN0 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAB3IL1Q8TBN0 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAB3IL1Q8TBN0 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.86■□□□□ 0.93
RAB3IL1Q8TBN0 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAB3IL1Q8TBN0 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAB3IL1Q8TBN0 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAB3IL1Q8TBN0 OR2I1P-207ENST00000453522 948 ntBASIC20.86■□□□□ 0.93
RAB3IL1Q8TBN0 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
RAB3IL1Q8TBN0 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.86■□□□□ 0.93
RAB3IL1Q8TBN0 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RAB3IL1Q8TBN0 pRNA.6-201ENST00000610482 90 ntBASIC20.86■□□□□ 0.93
RAB3IL1Q8TBN0 pRNA.5-201ENST00000612139 90 ntBASIC20.86■□□□□ 0.93
RAB3IL1Q8TBN0 pRNA.11-201ENST00000618423 90 ntBASIC20.86■□□□□ 0.93
RAB3IL1Q8TBN0 pRNA.13-201ENST00000619112 90 ntBASIC20.86■□□□□ 0.93
RAB3IL1Q8TBN0 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
RAB3IL1Q8TBN0 AC003102.1-202ENST00000563394 1796 ntBASIC20.86■□□□□ 0.93
RAB3IL1Q8TBN0 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAB3IL1Q8TBN0 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
RAB3IL1Q8TBN0 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAB3IL1Q8TBN0 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAB3IL1Q8TBN0 AC006128.1-201ENST00000624704 1661 ntBASIC20.86■□□□□ 0.93
RAB3IL1Q8TBN0 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAB3IL1Q8TBN0 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAB3IL1Q8TBN0 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.85■□□□□ 0.93
RAB3IL1Q8TBN0 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAB3IL1Q8TBN0 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAB3IL1Q8TBN0 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAB3IL1Q8TBN0 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
RAB3IL1Q8TBN0 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAB3IL1Q8TBN0 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.85■□□□□ 0.93
RAB3IL1Q8TBN0 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.85■□□□□ 0.93
RAB3IL1Q8TBN0 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.85■□□□□ 0.93
RAB3IL1Q8TBN0 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.85■□□□□ 0.93
RAB3IL1Q8TBN0 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
RAB3IL1Q8TBN0 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RAB3IL1Q8TBN0 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
RAB3IL1Q8TBN0 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
RAB3IL1Q8TBN0 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAB3IL1Q8TBN0 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
RAB3IL1Q8TBN0 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.84■□□□□ 0.93
RAB3IL1Q8TBN0 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.84■□□□□ 0.93
RAB3IL1Q8TBN0 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
RAB3IL1Q8TBN0 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAB3IL1Q8TBN0 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAB3IL1Q8TBN0 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAB3IL1Q8TBN0 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.84■□□□□ 0.93
RAB3IL1Q8TBN0 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAB3IL1Q8TBN0 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAB3IL1Q8TBN0 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.84■□□□□ 0.93
RAB3IL1Q8TBN0 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.84■□□□□ 0.93
RAB3IL1Q8TBN0 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms