Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC16.45■□□□□ 0.22
LINC01006Q8NI28 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC16.45■□□□□ 0.22
LINC01006Q8NI28 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LINC01006Q8NI28 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LINC01006Q8NI28 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LINC01006Q8NI28 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LINC01006Q8NI28 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC16.44■□□□□ 0.22
LINC01006Q8NI28 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
LINC01006Q8NI28 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
LINC01006Q8NI28 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LINC01006Q8NI28 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC16.44■□□□□ 0.22
LINC01006Q8NI28 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC16.44■□□□□ 0.22
LINC01006Q8NI28 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC16.44■□□□□ 0.22
LINC01006Q8NI28 AP006294.2-201ENST00000641667 209 ntBASIC16.44■□□□□ 0.22
LINC01006Q8NI28 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
LINC01006Q8NI28 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LINC01006Q8NI28 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LINC01006Q8NI28 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LINC01006Q8NI28 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC16.44■□□□□ 0.22
LINC01006Q8NI28 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LINC01006Q8NI28 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LINC01006Q8NI28 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LINC01006Q8NI28 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LINC01006Q8NI28 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LINC01006Q8NI28 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
LINC01006Q8NI28 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC16.43■□□□□ 0.22
LINC01006Q8NI28 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
LINC01006Q8NI28 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
LINC01006Q8NI28 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LINC01006Q8NI28 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
LINC01006Q8NI28 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
LINC01006Q8NI28 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
LINC01006Q8NI28 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC16.43■□□□□ 0.22
LINC01006Q8NI28 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
LINC01006Q8NI28 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC16.43■□□□□ 0.22
LINC01006Q8NI28 GCSHP5-201ENST00000443090 522 ntBASIC16.43■□□□□ 0.22
LINC01006Q8NI28 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
LINC01006Q8NI28 CASP6-205ENST00000505486 538 ntTSL 4 BASIC16.43■□□□□ 0.22
LINC01006Q8NI28 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LINC01006Q8NI28 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC16.43■□□□□ 0.22
LINC01006Q8NI28 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
LINC01006Q8NI28 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LINC01006Q8NI28 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC16.43■□□□□ 0.22
LINC01006Q8NI28 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
LINC01006Q8NI28 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINC01006Q8NI28 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC16.42■□□□□ 0.22
LINC01006Q8NI28 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINC01006Q8NI28 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
LINC01006Q8NI28 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC16.42■□□□□ 0.22
LINC01006Q8NI28 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
LINC01006Q8NI28 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINC01006Q8NI28 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINC01006Q8NI28 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINC01006Q8NI28 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINC01006Q8NI28 AC091799.1-201ENST00000422823 811 ntBASIC16.42■□□□□ 0.22
LINC01006Q8NI28 AC245052.3-201ENST00000450182 901 ntBASIC16.42■□□□□ 0.22
LINC01006Q8NI28 AC128676.1-201ENST00000454392 318 ntBASIC16.42■□□□□ 0.22
LINC01006Q8NI28 CDV3P1-201ENST00000471403 739 ntBASIC16.42■□□□□ 0.22
LINC01006Q8NI28 UNC93B5-201ENST00000530315 699 ntBASIC16.42■□□□□ 0.22
LINC01006Q8NI28 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC16.42■□□□□ 0.22
LINC01006Q8NI28 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC16.42■□□□□ 0.22
LINC01006Q8NI28 FAM21FP-204ENST00000608637 956 ntBASIC16.42■□□□□ 0.22
LINC01006Q8NI28 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINC01006Q8NI28 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINC01006Q8NI28 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC16.42■□□□□ 0.22
LINC01006Q8NI28 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC16.42■□□□□ 0.22
LINC01006Q8NI28 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LINC01006Q8NI28 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
LINC01006Q8NI28 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINC01006Q8NI28 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
LINC01006Q8NI28 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
LINC01006Q8NI28 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LINC01006Q8NI28 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LINC01006Q8NI28 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
LINC01006Q8NI28 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
LINC01006Q8NI28 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LINC01006Q8NI28 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC16.41■□□□□ 0.22
LINC01006Q8NI28 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
LINC01006Q8NI28 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC16.41■□□□□ 0.22
LINC01006Q8NI28 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LINC01006Q8NI28 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LINC01006Q8NI28 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LINC01006Q8NI28 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LINC01006Q8NI28 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINC01006Q8NI28 KRT17P1-201ENST00000399211 1546 ntBASIC16.4■□□□□ 0.22
LINC01006Q8NI28 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINC01006Q8NI28 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC16.4■□□□□ 0.22
LINC01006Q8NI28 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.4■□□□□ 0.22
LINC01006Q8NI28 AL355472.2-201ENST00000422958 438 ntBASIC16.4■□□□□ 0.22
LINC01006Q8NI28 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC16.4■□□□□ 0.22
LINC01006Q8NI28 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINC01006Q8NI28 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.4■□□□□ 0.22
LINC01006Q8NI28 AL158047.1-201ENST00000445918 881 ntBASIC16.4■□□□□ 0.22
LINC01006Q8NI28 AC026366.1-201ENST00000488803 879 ntBASIC16.4■□□□□ 0.22
LINC01006Q8NI28 AC142381.4-202ENST00000563973 229 ntBASIC16.4■□□□□ 0.22
LINC01006Q8NI28 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LINC01006Q8NI28 AC100791.3-201ENST00000617619 330 ntBASIC16.4■□□□□ 0.22
LINC01006Q8NI28 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINC01006Q8NI28 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LINC01006Q8NI28 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms