Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.82■□□□□ 0.44
CLDND2Q8NHS1 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.82■□□□□ 0.44
CLDND2Q8NHS1 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.82■□□□□ 0.44
CLDND2Q8NHS1 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDND2Q8NHS1 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDND2Q8NHS1 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.82■□□□□ 0.44
CLDND2Q8NHS1 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.82■□□□□ 0.44
CLDND2Q8NHS1 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDND2Q8NHS1 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDND2Q8NHS1 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CLDND2Q8NHS1 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDND2Q8NHS1 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDND2Q8NHS1 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDND2Q8NHS1 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDND2Q8NHS1 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDND2Q8NHS1 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CLDND2Q8NHS1 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.81■□□□□ 0.44
CLDND2Q8NHS1 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.81■□□□□ 0.44
CLDND2Q8NHS1 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.81■□□□□ 0.44
CLDND2Q8NHS1 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.81■□□□□ 0.44
CLDND2Q8NHS1 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.81■□□□□ 0.44
CLDND2Q8NHS1 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDND2Q8NHS1 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDND2Q8NHS1 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDND2Q8NHS1 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLDND2Q8NHS1 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.81■□□□□ 0.44
CLDND2Q8NHS1 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDND2Q8NHS1 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CLDND2Q8NHS1 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
CLDND2Q8NHS1 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDND2Q8NHS1 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC17.8■□□□□ 0.44
CLDND2Q8NHS1 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDND2Q8NHS1 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.8■□□□□ 0.44
CLDND2Q8NHS1 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.8■□□□□ 0.44
CLDND2Q8NHS1 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLDND2Q8NHS1 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDND2Q8NHS1 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CLDND2Q8NHS1 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDND2Q8NHS1 C11orf96-202ENST00000528572 1834 ntBASIC17.79■□□□□ 0.44
CLDND2Q8NHS1 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLDND2Q8NHS1 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDND2Q8NHS1 AC087742.1-201ENST00000575880 1738 ntBASIC17.79■□□□□ 0.44
CLDND2Q8NHS1 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17.79■□□□□ 0.44
CLDND2Q8NHS1 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDND2Q8NHS1 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.79■□□□□ 0.44
CLDND2Q8NHS1 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.79■□□□□ 0.44
CLDND2Q8NHS1 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.79■□□□□ 0.44
CLDND2Q8NHS1 AC104771.1-201ENST00000603335 964 ntBASIC17.79■□□□□ 0.44
CLDND2Q8NHS1 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
CLDND2Q8NHS1 MYCNOS-205ENST00000641950 531 ntBASIC17.79■□□□□ 0.44
CLDND2Q8NHS1 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDND2Q8NHS1 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.79■□□□□ 0.44
CLDND2Q8NHS1 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC17.79■□□□□ 0.44
CLDND2Q8NHS1 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CLDND2Q8NHS1 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.79■□□□□ 0.44
CLDND2Q8NHS1 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLDND2Q8NHS1 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CLDND2Q8NHS1 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CLDND2Q8NHS1 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDND2Q8NHS1 AP006587.3-201ENST00000525742 1516 ntBASIC17.78■□□□□ 0.44
CLDND2Q8NHS1 AC073130.3-201ENST00000624389 2278 ntBASIC17.78■□□□□ 0.44
CLDND2Q8NHS1 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDND2Q8NHS1 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDND2Q8NHS1 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.78■□□□□ 0.44
CLDND2Q8NHS1 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDND2Q8NHS1 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDND2Q8NHS1 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDND2Q8NHS1 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDND2Q8NHS1 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDND2Q8NHS1 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLDND2Q8NHS1 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLDND2Q8NHS1 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CLDND2Q8NHS1 AC010141.2-201ENST00000452426 721 ntBASIC17.78■□□□□ 0.44
CLDND2Q8NHS1 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLDND2Q8NHS1 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.78■□□□□ 0.44
CLDND2Q8NHS1 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CLDND2Q8NHS1 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.78■□□□□ 0.44
CLDND2Q8NHS1 DUX4L16-201ENST00000555130 1264 ntBASIC17.78■□□□□ 0.44
CLDND2Q8NHS1 AC138907.5-202ENST00000569484 235 ntBASIC17.78■□□□□ 0.44
CLDND2Q8NHS1 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CLDND2Q8NHS1 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.78■□□□□ 0.44
CLDND2Q8NHS1 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CLDND2Q8NHS1 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CLDND2Q8NHS1 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDND2Q8NHS1 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDND2Q8NHS1 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDND2Q8NHS1 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.78■□□□□ 0.44
CLDND2Q8NHS1 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDND2Q8NHS1 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CLDND2Q8NHS1 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC17.78■□□□□ 0.44
CLDND2Q8NHS1 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CLDND2Q8NHS1 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDND2Q8NHS1 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDND2Q8NHS1 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDND2Q8NHS1 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC17.77■□□□□ 0.44
CLDND2Q8NHS1 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.77■□□□□ 0.44
CLDND2Q8NHS1 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDND2Q8NHS1 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDND2Q8NHS1 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLDND2Q8NHS1 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms