Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC33.12■■■□□ 2.89
VPS8Q8N3P4 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC33.12■■■□□ 2.89
VPS8Q8N3P4 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
VPS8Q8N3P4 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
VPS8Q8N3P4 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
VPS8Q8N3P4 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC33.12■■■□□ 2.89
VPS8Q8N3P4 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
VPS8Q8N3P4 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC33.12■■■□□ 2.89
VPS8Q8N3P4 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
VPS8Q8N3P4 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
VPS8Q8N3P4 AC007322.1-201ENST00000426983 750 ntBASIC33.11■■■□□ 2.89
VPS8Q8N3P4 AC006970.2-201ENST00000450065 779 ntBASIC33.11■■■□□ 2.89
VPS8Q8N3P4 AC005181.1-201ENST00000604782 1256 ntBASIC33.11■■■□□ 2.89
VPS8Q8N3P4 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC33.11■■■□□ 2.89
VPS8Q8N3P4 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
VPS8Q8N3P4 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC33.11■■■□□ 2.89
VPS8Q8N3P4 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
VPS8Q8N3P4 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC33.11■■■□□ 2.89
VPS8Q8N3P4 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC33.11■■■□□ 2.89
VPS8Q8N3P4 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC33.11■■■□□ 2.89
VPS8Q8N3P4 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC33.11■■■□□ 2.89
VPS8Q8N3P4 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC33.11■■■□□ 2.89
VPS8Q8N3P4 MAP2K4P1-201ENST00000438453 1195 ntBASIC33.11■■■□□ 2.89
VPS8Q8N3P4 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
VPS8Q8N3P4 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC33.11■■■□□ 2.89
VPS8Q8N3P4 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC33.11■■■□□ 2.89
VPS8Q8N3P4 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
VPS8Q8N3P4 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
VPS8Q8N3P4 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
VPS8Q8N3P4 AC068338.2-201ENST00000563278 1430 ntBASIC33.1■■■□□ 2.89
VPS8Q8N3P4 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC33.1■■■□□ 2.89
VPS8Q8N3P4 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
VPS8Q8N3P4 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
VPS8Q8N3P4 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
VPS8Q8N3P4 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC33.1■■■□□ 2.89
VPS8Q8N3P4 NCF1B-203ENST00000435988 1254 ntBASIC33.1■■■□□ 2.89
VPS8Q8N3P4 CD44-222ENST00000526025 1052 ntTSL 2 BASIC33.1■■■□□ 2.89
VPS8Q8N3P4 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC33.1■■■□□ 2.89
VPS8Q8N3P4 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC33.09■■■□□ 2.89
VPS8Q8N3P4 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
VPS8Q8N3P4 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
VPS8Q8N3P4 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC33.09■■■□□ 2.89
VPS8Q8N3P4 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC33.09■■■□□ 2.89
VPS8Q8N3P4 ID1-201ENST00000376105 1233 ntBASIC33.09■■■□□ 2.89
VPS8Q8N3P4 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
VPS8Q8N3P4 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC33.09■■■□□ 2.89
VPS8Q8N3P4 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC33.09■■■□□ 2.89
VPS8Q8N3P4 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
VPS8Q8N3P4 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC33.09■■■□□ 2.89
VPS8Q8N3P4 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC33.09■■■□□ 2.89
VPS8Q8N3P4 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC33.09■■■□□ 2.89
VPS8Q8N3P4 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
VPS8Q8N3P4 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC33.09■■■□□ 2.89
VPS8Q8N3P4 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC33.08■■■□□ 2.89
VPS8Q8N3P4 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
VPS8Q8N3P4 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC33.08■■■□□ 2.89
VPS8Q8N3P4 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC33.08■■■□□ 2.89
VPS8Q8N3P4 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
VPS8Q8N3P4 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC33.08■■■□□ 2.89
VPS8Q8N3P4 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC33.08■■■□□ 2.89
VPS8Q8N3P4 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
VPS8Q8N3P4 HLA-L-209ENST00000420110 1011 ntBASIC33.07■■■□□ 2.88
VPS8Q8N3P4 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
VPS8Q8N3P4 GXYLT1P5-201ENST00000614548 1189 ntBASIC33.07■■■□□ 2.88
VPS8Q8N3P4 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC33.07■■■□□ 2.88
VPS8Q8N3P4 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC33.07■■■□□ 2.88
VPS8Q8N3P4 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC33.07■■■□□ 2.88
VPS8Q8N3P4 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
VPS8Q8N3P4 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC33.06■■■□□ 2.88
VPS8Q8N3P4 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC33.06■■■□□ 2.88
VPS8Q8N3P4 AC244015.2-201ENST00000616358 1861 ntBASIC33.06■■■□□ 2.88
VPS8Q8N3P4 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
VPS8Q8N3P4 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
VPS8Q8N3P4 AC104771.1-201ENST00000603335 964 ntBASIC33.06■■■□□ 2.88
VPS8Q8N3P4 TUB-203ENST00000534099 1759 ntTSL 2 BASIC33.06■■■□□ 2.88
VPS8Q8N3P4 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC33.06■■■□□ 2.88
VPS8Q8N3P4 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC33.06■■■□□ 2.88
VPS8Q8N3P4 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC33.06■■■□□ 2.88
VPS8Q8N3P4 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
VPS8Q8N3P4 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC33.05■■■□□ 2.88
VPS8Q8N3P4 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC33.05■■■□□ 2.88
VPS8Q8N3P4 METTL15-202ENST00000403099 795 ntTSL 5 BASIC33.05■■■□□ 2.88
VPS8Q8N3P4 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC33.05■■■□□ 2.88
VPS8Q8N3P4 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC33.05■■■□□ 2.88
VPS8Q8N3P4 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC33.05■■■□□ 2.88
VPS8Q8N3P4 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC33.05■■■□□ 2.88
VPS8Q8N3P4 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC33.05■■■□□ 2.88
VPS8Q8N3P4 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
VPS8Q8N3P4 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC33.04■■■□□ 2.88
VPS8Q8N3P4 AC091799.1-201ENST00000422823 811 ntBASIC33.03■■■□□ 2.88
VPS8Q8N3P4 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC33.03■■■□□ 2.88
VPS8Q8N3P4 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC33.03■■■□□ 2.88
VPS8Q8N3P4 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC33.03■■■□□ 2.88
VPS8Q8N3P4 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
VPS8Q8N3P4 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC33.03■■■□□ 2.88
VPS8Q8N3P4 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC33.03■■■□□ 2.88
VPS8Q8N3P4 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
VPS8Q8N3P4 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC33.03■■■□□ 2.88
VPS8Q8N3P4 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC33.03■■■□□ 2.88
VPS8Q8N3P4 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms