Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHPFQ8IZ52 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHPFQ8IZ52 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.43■■□□□ 1.02
CHPFQ8IZ52 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
CHPFQ8IZ52 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHPFQ8IZ52 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHPFQ8IZ52 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.43■■□□□ 1.02
CHPFQ8IZ52 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
CHPFQ8IZ52 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CHPFQ8IZ52 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CHPFQ8IZ52 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CHPFQ8IZ52 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CHPFQ8IZ52 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.42■■□□□ 1.02
CHPFQ8IZ52 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CHPFQ8IZ52 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CHPFQ8IZ52 KRT16P2-201ENST00000414673 1423 ntBASIC21.42■■□□□ 1.02
CHPFQ8IZ52 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CHPFQ8IZ52 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CHPFQ8IZ52 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.42■■□□□ 1.02
CHPFQ8IZ52 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CHPFQ8IZ52 AC098934.4-201ENST00000564127 592 ntBASIC21.42■■□□□ 1.02
CHPFQ8IZ52 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.42■■□□□ 1.02
CHPFQ8IZ52 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.42■■□□□ 1.02
CHPFQ8IZ52 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CHPFQ8IZ52 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CHPFQ8IZ52 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHPFQ8IZ52 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CHPFQ8IZ52 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHPFQ8IZ52 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
CHPFQ8IZ52 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHPFQ8IZ52 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.41■■□□□ 1.02
CHPFQ8IZ52 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CHPFQ8IZ52 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.41■■□□□ 1.02
CHPFQ8IZ52 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.41■■□□□ 1.02
CHPFQ8IZ52 AC016405.3-201ENST00000607710 860 ntBASIC21.41■■□□□ 1.02
CHPFQ8IZ52 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CHPFQ8IZ52 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CHPFQ8IZ52 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CHPFQ8IZ52 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.41■■□□□ 1.02
CHPFQ8IZ52 AC003102.1-202ENST00000563394 1796 ntBASIC21.41■■□□□ 1.02
CHPFQ8IZ52 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHPFQ8IZ52 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHPFQ8IZ52 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.4■■□□□ 1.02
CHPFQ8IZ52 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.4■■□□□ 1.02
CHPFQ8IZ52 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.4■■□□□ 1.02
CHPFQ8IZ52 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHPFQ8IZ52 MIPEPP3-201ENST00000412105 444 ntBASIC21.4■■□□□ 1.02
CHPFQ8IZ52 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.4■■□□□ 1.02
CHPFQ8IZ52 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.4■■□□□ 1.02
CHPFQ8IZ52 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHPFQ8IZ52 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CHPFQ8IZ52 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CHPFQ8IZ52 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.4■■□□□ 1.02
CHPFQ8IZ52 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHPFQ8IZ52 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.4■■□□□ 1.02
CHPFQ8IZ52 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.4■■□□□ 1.02
CHPFQ8IZ52 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.4■■□□□ 1.02
CHPFQ8IZ52 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
CHPFQ8IZ52 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CHPFQ8IZ52 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
CHPFQ8IZ52 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.39■■□□□ 1.02
CHPFQ8IZ52 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
CHPFQ8IZ52 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CHPFQ8IZ52 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.39■■□□□ 1.01
CHPFQ8IZ52 AC093787.1-201ENST00000450396 207 ntBASIC21.39■■□□□ 1.01
CHPFQ8IZ52 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.39■■□□□ 1.01
CHPFQ8IZ52 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.39■■□□□ 1.01
CHPFQ8IZ52 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CHPFQ8IZ52 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
CHPFQ8IZ52 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CHPFQ8IZ52 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.39■■□□□ 1.01
CHPFQ8IZ52 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CHPFQ8IZ52 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CHPFQ8IZ52 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CHPFQ8IZ52 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CHPFQ8IZ52 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CHPFQ8IZ52 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.38■■□□□ 1.01
CHPFQ8IZ52 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.38■■□□□ 1.01
CHPFQ8IZ52 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.38■■□□□ 1.01
CHPFQ8IZ52 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.38■■□□□ 1.01
CHPFQ8IZ52 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.38■■□□□ 1.01
CHPFQ8IZ52 AC061975.6-201ENST00000579045 1553 ntBASIC21.38■■□□□ 1.01
CHPFQ8IZ52 AC092053.2-201ENST00000640557 1818 ntBASIC21.38■■□□□ 1.01
CHPFQ8IZ52 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.38■■□□□ 1.01
CHPFQ8IZ52 RBM17P2-201ENST00000616397 1405 ntBASIC21.38■■□□□ 1.01
CHPFQ8IZ52 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.37■■□□□ 1.01
CHPFQ8IZ52 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CHPFQ8IZ52 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CHPFQ8IZ52 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CHPFQ8IZ52 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CHPFQ8IZ52 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CHPFQ8IZ52 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
CHPFQ8IZ52 AL512625.2-201ENST00000417533 625 ntBASIC21.37■■□□□ 1.01
CHPFQ8IZ52 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.37■■□□□ 1.01
CHPFQ8IZ52 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.37■■□□□ 1.01
CHPFQ8IZ52 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CHPFQ8IZ52 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.37■■□□□ 1.01
CHPFQ8IZ52 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CHPFQ8IZ52 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CHPFQ8IZ52 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms