Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC22.57■■□□□ 1.2
CCDC170Q8IYT3 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC170Q8IYT3 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
CCDC170Q8IYT3 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC170Q8IYT3 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
CCDC170Q8IYT3 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC22.57■■□□□ 1.2
CCDC170Q8IYT3 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC170Q8IYT3 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC22.56■■□□□ 1.2
CCDC170Q8IYT3 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
CCDC170Q8IYT3 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC170Q8IYT3 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
CCDC170Q8IYT3 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC170Q8IYT3 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC170Q8IYT3 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC22.56■■□□□ 1.2
CCDC170Q8IYT3 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC170Q8IYT3 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC22.56■■□□□ 1.2
CCDC170Q8IYT3 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC170Q8IYT3 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC170Q8IYT3 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
CCDC170Q8IYT3 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC170Q8IYT3 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC22.56■■□□□ 1.2
CCDC170Q8IYT3 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC170Q8IYT3 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC170Q8IYT3 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC170Q8IYT3 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC22.55■■□□□ 1.2
CCDC170Q8IYT3 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
CCDC170Q8IYT3 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CCDC170Q8IYT3 SNX3-202ENST00000349379 890 ntTSL 2 BASIC22.55■■□□□ 1.2
CCDC170Q8IYT3 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CCDC170Q8IYT3 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC22.55■■□□□ 1.2
CCDC170Q8IYT3 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC22.55■■□□□ 1.2
CCDC170Q8IYT3 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC22.55■■□□□ 1.2
CCDC170Q8IYT3 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC22.55■■□□□ 1.2
CCDC170Q8IYT3 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC22.55■■□□□ 1.2
CCDC170Q8IYT3 AC073314.1-201ENST00000568729 2216 ntBASIC22.55■■□□□ 1.2
CCDC170Q8IYT3 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CCDC170Q8IYT3 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC22.55■■□□□ 1.2
CCDC170Q8IYT3 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC170Q8IYT3 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC170Q8IYT3 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC170Q8IYT3 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC22.54■■□□□ 1.2
CCDC170Q8IYT3 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC22.54■■□□□ 1.2
CCDC170Q8IYT3 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC170Q8IYT3 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC170Q8IYT3 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC22.54■■□□□ 1.2
CCDC170Q8IYT3 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC22.54■■□□□ 1.2
CCDC170Q8IYT3 SRR-208ENST00000576848 588 ntTSL 4 BASIC22.54■■□□□ 1.2
CCDC170Q8IYT3 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC22.54■■□□□ 1.2
CCDC170Q8IYT3 SMUG1P1-201ENST00000590640 811 ntBASIC22.54■■□□□ 1.2
CCDC170Q8IYT3 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC170Q8IYT3 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC170Q8IYT3 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
CCDC170Q8IYT3 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC170Q8IYT3 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
CCDC170Q8IYT3 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CCDC170Q8IYT3 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCDC170Q8IYT3 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
CCDC170Q8IYT3 ADM-207ENST00000530439 1839 ntTSL 2 BASIC22.53■■□□□ 1.2
CCDC170Q8IYT3 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CCDC170Q8IYT3 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
CCDC170Q8IYT3 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCDC170Q8IYT3 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCDC170Q8IYT3 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCDC170Q8IYT3 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCDC170Q8IYT3 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC22.53■■□□□ 1.2
CCDC170Q8IYT3 AL121603.2-201ENST00000557373 2117 ntBASIC22.52■■□□□ 1.2
CCDC170Q8IYT3 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
CCDC170Q8IYT3 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CCDC170Q8IYT3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
CCDC170Q8IYT3 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CCDC170Q8IYT3 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CCDC170Q8IYT3 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CCDC170Q8IYT3 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC22.52■■□□□ 1.2
CCDC170Q8IYT3 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC22.52■■□□□ 1.2
CCDC170Q8IYT3 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
CCDC170Q8IYT3 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CCDC170Q8IYT3 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CCDC170Q8IYT3 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
CCDC170Q8IYT3 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
CCDC170Q8IYT3 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC22.51■■□□□ 1.19
CCDC170Q8IYT3 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
CCDC170Q8IYT3 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CCDC170Q8IYT3 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
CCDC170Q8IYT3 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
CCDC170Q8IYT3 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CCDC170Q8IYT3 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CCDC170Q8IYT3 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC22.51■■□□□ 1.19
CCDC170Q8IYT3 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
CCDC170Q8IYT3 RPP21-222ENST00000433076 577 ntTSL 2 BASIC22.51■■□□□ 1.19
CCDC170Q8IYT3 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
CCDC170Q8IYT3 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CCDC170Q8IYT3 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CCDC170Q8IYT3 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
CCDC170Q8IYT3 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CCDC170Q8IYT3 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CCDC170Q8IYT3 AC121338.2-201ENST00000622535 1744 ntBASIC22.51■■□□□ 1.19
CCDC170Q8IYT3 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
CCDC170Q8IYT3 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CCDC170Q8IYT3 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC22.5■■□□□ 1.19
CCDC170Q8IYT3 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms