Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC22.15■■□□□ 1.14
SCUBE3Q8IX30 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SCUBE3Q8IX30 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SCUBE3Q8IX30 STX5-203ENST00000394690 1568 ntTSL 5 BASIC22.15■■□□□ 1.14
SCUBE3Q8IX30 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
SCUBE3Q8IX30 AC061975.6-201ENST00000579045 1553 ntBASIC22.15■■□□□ 1.14
SCUBE3Q8IX30 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SCUBE3Q8IX30 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SCUBE3Q8IX30 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.14
SCUBE3Q8IX30 AC026310.3-201ENST00000625186 2373 ntBASIC22.14■■□□□ 1.14
SCUBE3Q8IX30 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
SCUBE3Q8IX30 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC22.14■■□□□ 1.14
SCUBE3Q8IX30 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC22.14■■□□□ 1.14
SCUBE3Q8IX30 AC010141.2-201ENST00000452426 721 ntBASIC22.14■■□□□ 1.13
SCUBE3Q8IX30 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC22.14■■□□□ 1.13
SCUBE3Q8IX30 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SCUBE3Q8IX30 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC22.14■■□□□ 1.13
SCUBE3Q8IX30 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SCUBE3Q8IX30 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SCUBE3Q8IX30 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
SCUBE3Q8IX30 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SCUBE3Q8IX30 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SCUBE3Q8IX30 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SCUBE3Q8IX30 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
SCUBE3Q8IX30 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
SCUBE3Q8IX30 AC007375.3-201ENST00000600936 2314 ntBASIC22.13■■□□□ 1.13
SCUBE3Q8IX30 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SCUBE3Q8IX30 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SCUBE3Q8IX30 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SCUBE3Q8IX30 NAA20-201ENST00000310450 920 ntTSL 2 BASIC22.13■■□□□ 1.13
SCUBE3Q8IX30 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC22.13■■□□□ 1.13
SCUBE3Q8IX30 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC22.13■■□□□ 1.13
SCUBE3Q8IX30 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC22.13■■□□□ 1.13
SCUBE3Q8IX30 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SCUBE3Q8IX30 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SCUBE3Q8IX30 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC22.12■■□□□ 1.13
SCUBE3Q8IX30 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SCUBE3Q8IX30 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC22.12■■□□□ 1.13
SCUBE3Q8IX30 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SCUBE3Q8IX30 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC22.12■■□□□ 1.13
SCUBE3Q8IX30 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC22.12■■□□□ 1.13
SCUBE3Q8IX30 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC22.12■■□□□ 1.13
SCUBE3Q8IX30 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SCUBE3Q8IX30 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
SCUBE3Q8IX30 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SCUBE3Q8IX30 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC22.12■■□□□ 1.13
SCUBE3Q8IX30 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC22.11■■□□□ 1.13
SCUBE3Q8IX30 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC22.11■■□□□ 1.13
SCUBE3Q8IX30 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
SCUBE3Q8IX30 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
SCUBE3Q8IX30 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SCUBE3Q8IX30 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC22.11■■□□□ 1.13
SCUBE3Q8IX30 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
SCUBE3Q8IX30 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SCUBE3Q8IX30 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC22.11■■□□□ 1.13
SCUBE3Q8IX30 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
SCUBE3Q8IX30 SLC7A5P2-201ENST00000553010 536 ntBASIC22.11■■□□□ 1.13
SCUBE3Q8IX30 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC22.11■■□□□ 1.13
SCUBE3Q8IX30 AC022517.1-201ENST00000592429 346 ntBASIC22.11■■□□□ 1.13
SCUBE3Q8IX30 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC22.11■■□□□ 1.13
SCUBE3Q8IX30 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SCUBE3Q8IX30 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SCUBE3Q8IX30 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SCUBE3Q8IX30 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
SCUBE3Q8IX30 STX7-201ENST00000367937 1090 ntTSL 5 BASIC22.1■■□□□ 1.13
SCUBE3Q8IX30 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC22.1■■□□□ 1.13
SCUBE3Q8IX30 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC22.1■■□□□ 1.13
SCUBE3Q8IX30 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
SCUBE3Q8IX30 AC008175.2-201ENST00000612840 297 ntBASIC22.1■■□□□ 1.13
SCUBE3Q8IX30 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SCUBE3Q8IX30 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SCUBE3Q8IX30 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC22.1■■□□□ 1.13
SCUBE3Q8IX30 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
SCUBE3Q8IX30 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SCUBE3Q8IX30 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
SCUBE3Q8IX30 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SCUBE3Q8IX30 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC22.09■■□□□ 1.13
SCUBE3Q8IX30 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SCUBE3Q8IX30 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC22.09■■□□□ 1.13
SCUBE3Q8IX30 DBI-210ENST00000542275 757 ntTSL 5 BASIC22.09■■□□□ 1.13
SCUBE3Q8IX30 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC22.09■■□□□ 1.13
SCUBE3Q8IX30 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
SCUBE3Q8IX30 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC22.09■■□□□ 1.13
SCUBE3Q8IX30 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
SCUBE3Q8IX30 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
SCUBE3Q8IX30 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SCUBE3Q8IX30 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SCUBE3Q8IX30 POU5F1P4-201ENST00000413175 1085 ntBASIC22.08■■□□□ 1.13
SCUBE3Q8IX30 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC22.08■■□□□ 1.13
SCUBE3Q8IX30 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC22.08■■□□□ 1.13
SCUBE3Q8IX30 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC22.08■■□□□ 1.13
SCUBE3Q8IX30 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SCUBE3Q8IX30 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC22.08■■□□□ 1.12
SCUBE3Q8IX30 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SCUBE3Q8IX30 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
SCUBE3Q8IX30 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC22.07■■□□□ 1.12
SCUBE3Q8IX30 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SCUBE3Q8IX30 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SCUBE3Q8IX30 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC22.07■■□□□ 1.12
SCUBE3Q8IX30 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms