Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TUBA1AQ71U36 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TUBA1AQ71U36 SUDS3P1-201ENST00000505831 966 ntBASIC19.28■□□□□ 0.68
TUBA1AQ71U36 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.28■□□□□ 0.68
TUBA1AQ71U36 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TUBA1AQ71U36 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TUBA1AQ71U36 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
TUBA1AQ71U36 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
TUBA1AQ71U36 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TUBA1AQ71U36 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TUBA1AQ71U36 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
TUBA1AQ71U36 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TUBA1AQ71U36 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TUBA1AQ71U36 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.28■□□□□ 0.68
TUBA1AQ71U36 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TUBA1AQ71U36 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TUBA1AQ71U36 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TUBA1AQ71U36 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
TUBA1AQ71U36 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TUBA1AQ71U36 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.27■□□□□ 0.68
TUBA1AQ71U36 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.27■□□□□ 0.68
TUBA1AQ71U36 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TUBA1AQ71U36 MIR939-201ENST00000401314 82 ntBASIC19.27■□□□□ 0.68
TUBA1AQ71U36 AC099791.1-201ENST00000416440 715 ntBASIC19.27■□□□□ 0.68
TUBA1AQ71U36 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TUBA1AQ71U36 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TUBA1AQ71U36 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TUBA1AQ71U36 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TUBA1AQ71U36 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TUBA1AQ71U36 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
TUBA1AQ71U36 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TUBA1AQ71U36 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TUBA1AQ71U36 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TUBA1AQ71U36 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.26■□□□□ 0.67
TUBA1AQ71U36 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.26■□□□□ 0.67
TUBA1AQ71U36 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.26■□□□□ 0.67
TUBA1AQ71U36 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.26■□□□□ 0.67
TUBA1AQ71U36 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TUBA1AQ71U36 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TUBA1AQ71U36 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.26■□□□□ 0.67
TUBA1AQ71U36 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TUBA1AQ71U36 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
TUBA1AQ71U36 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TUBA1AQ71U36 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.26■□□□□ 0.67
TUBA1AQ71U36 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TUBA1AQ71U36 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TUBA1AQ71U36 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.26■□□□□ 0.67
TUBA1AQ71U36 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.26■□□□□ 0.67
TUBA1AQ71U36 AL136967.2-201ENST00000623968 743 ntBASIC19.26■□□□□ 0.67
TUBA1AQ71U36 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.26■□□□□ 0.67
TUBA1AQ71U36 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TUBA1AQ71U36 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TUBA1AQ71U36 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
TUBA1AQ71U36 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TUBA1AQ71U36 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TUBA1AQ71U36 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TUBA1AQ71U36 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TUBA1AQ71U36 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TUBA1AQ71U36 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TUBA1AQ71U36 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TUBA1AQ71U36 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TUBA1AQ71U36 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TUBA1AQ71U36 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.25■□□□□ 0.67
TUBA1AQ71U36 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TUBA1AQ71U36 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.25■□□□□ 0.67
TUBA1AQ71U36 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TUBA1AQ71U36 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TUBA1AQ71U36 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
TUBA1AQ71U36 BX842568.3-201ENST00000418104 571 ntBASIC19.25■□□□□ 0.67
TUBA1AQ71U36 AC233992.3-201ENST00000607491 485 ntBASIC19.25■□□□□ 0.67
TUBA1AQ71U36 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TUBA1AQ71U36 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TUBA1AQ71U36 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TUBA1AQ71U36 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
TUBA1AQ71U36 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.24■□□□□ 0.67
TUBA1AQ71U36 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TUBA1AQ71U36 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.24■□□□□ 0.67
TUBA1AQ71U36 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
TUBA1AQ71U36 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TUBA1AQ71U36 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TUBA1AQ71U36 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
TUBA1AQ71U36 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
TUBA1AQ71U36 OR2I1P-207ENST00000453522 948 ntBASIC19.24■□□□□ 0.67
TUBA1AQ71U36 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.24■□□□□ 0.67
TUBA1AQ71U36 AC027682.1-201ENST00000562846 899 ntBASIC19.24■□□□□ 0.67
TUBA1AQ71U36 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.24■□□□□ 0.67
TUBA1AQ71U36 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
TUBA1AQ71U36 LINC01960-201ENST00000563759 1884 ntBASIC19.24■□□□□ 0.67
TUBA1AQ71U36 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TUBA1AQ71U36 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
TUBA1AQ71U36 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TUBA1AQ71U36 AC019069.1-201ENST00000610008 1333 ntBASIC19.24■□□□□ 0.67
TUBA1AQ71U36 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TUBA1AQ71U36 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TUBA1AQ71U36 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
TUBA1AQ71U36 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TUBA1AQ71U36 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TUBA1AQ71U36 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.23■□□□□ 0.67
TUBA1AQ71U36 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.23■□□□□ 0.67
TUBA1AQ71U36 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms