Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.561e-6■■■□□ 19.2
LARP4Q71RC2 NGLY1-208ENST00000461491 552 ntTSL 45.25□□□□□ -1.571e-6■■■□□ 19.2
LARP4Q71RC2 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.581e-6■■■□□ 19.2
LARP4Q71RC2 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC5.02□□□□□ -1.611e-6■■■□□ 19.2
LARP4Q71RC2 MMS22L-204ENST00000484170 435 ntTSL 34.98□□□□□ -1.611e-6■■■□□ 19.2
LARP4Q71RC2 MMS22L-206ENST00000506256 732 ntTSL 34.98□□□□□ -1.611e-6■■■□□ 19.2
LARP4Q71RC2 ERC1-215ENST00000543263 513 ntTSL 34.78□□□□□ -1.641e-6■■■□□ 19.2
LARP4Q71RC2 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.58□□□□□ -1.681e-6■■■□□ 19.2
LARP4Q71RC2 NGLY1-206ENST00000427041 579 ntTSL 44.33□□□□□ -1.721e-6■■■□□ 19.2
LARP4Q71RC2 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.17□□□□□ -1.741e-6■■■□□ 19.2
LARP4Q71RC2 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.751e-6■■■□□ 19.2
LARP4Q71RC2 TANK-208ENST00000432002 600 ntTSL 54.06□□□□□ -1.761e-6■■■□□ 19.2
LARP4Q71RC2 KMT2C-208ENST00000473186 12854 ntTSL 1 (best)4.02□□□□□ -1.771e-6■■■□□ 19.2
LARP4Q71RC2 TANK-209ENST00000432692 576 ntTSL 53.66□□□□□ -1.821e-6■■■□□ 19.2
LARP4Q71RC2 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.941e-6■■■□□ 19.2
LARP4Q71RC2 TANK-222ENST00000489393 301 ntTSL 32.58□□□□□ -21e-6■■■□□ 19.2
LARP4Q71RC2 KTN1-208ENST00000459737 4793 ntTSL 1 (best)2.52□□□□□ -2.011e-6■■■□□ 19.2
LARP4Q71RC2 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.021e-6■■■□□ 19.2
LARP4Q71RC2 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.021e-6■■■□□ 19.2
LARP4Q71RC2 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.031e-6■■■□□ 19.2
LARP4Q71RC2 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.061e-6■■■□□ 19.2
LARP4Q71RC2 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.5□□□□□ -2.171e-6■■■□□ 19.2
LARP4Q71RC2 C22orf34-202ENST00000400023 1469 ntTSL 1 (best)14.82□□□□□ -0.041e-6■■■□□ 19.2
LARP4Q71RC2 SNRNP25-201ENST00000293861 1905 ntAPPRIS ALT2 TSL 1 (best)21.26■□□□□ 0.992e-7■■■□□ 19.2
LARP4Q71RC2 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.682e-7■■■□□ 19.2
LARP4Q71RC2 SNRNP25-203ENST00000397876 831 ntTSL 312.97□□□□□ -0.332e-7■■■□□ 19.2
LARP4Q71RC2 EMD-203ENST00000428228 946 ntTSL 317.19■□□□□ 0.341e-8■■■□□ 19.2
LARP4Q71RC2 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.14■□□□□ 0.974e-14■■■□□ 19.2
LARP4Q71RC2 CUTA-207ENST00000479249 562 ntTSL 36.64□□□□□ -1.353e-9■■■□□ 19.2
LARP4Q71RC2 CDK4-213ENST00000552713 685 ntTSL 27.57□□□□□ -1.24e-9■■■□□ 19.2
LARP4Q71RC2 JPT1-212ENST00000584079 382 ntTSL 57.77□□□□□ -1.172e-8■■■□□ 19.1
LARP4Q71RC2 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.132e-8■■■□□ 19.1
LARP4Q71RC2 ATP6V1F-202ENST00000492758 711 ntTSL 2 BASIC10.41□□□□□ -0.742e-8■■■□□ 19.1
LARP4Q71RC2 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.581e-7■■■□□ 19.1
LARP4Q71RC2 GSTP1-205ENST00000494593 1681 ntTSL 219.36■□□□□ 0.691e-7■■■□□ 19.1
LARP4Q71RC2 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC13.1□□□□□ -0.311e-7■■■□□ 19.1
LARP4Q71RC2 HK1-202ENST00000359426 3605 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.641e-6■■■□□ 19.1
LARP4Q71RC2 HK1-201ENST00000298649 3596 ntTSL 5 BASIC10.52□□□□□ -0.731e-6■■■□□ 19.1
LARP4Q71RC2 HK1-206ENST00000448642 3868 ntTSL 5 BASIC9.48□□□□□ -0.891e-6■■■□□ 19.1
LARP4Q71RC2 HK1-203ENST00000360289 3961 ntTSL 5 BASIC8.28□□□□□ -1.081e-6■■■□□ 19.1
LARP4Q71RC2 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.555e-9■■■□□ 19.1
LARP4Q71RC2 AUP1-204ENST00000463900 1645 ntTSL 1 (best)16.44■□□□□ 0.225e-9■■■□□ 19.1
LARP4Q71RC2 AUP1-202ENST00000425118 1581 ntTSL 1 (best)15.77■□□□□ 0.115e-9■■■□□ 19.1
LARP4Q71RC2 AUP1-206ENST00000466894 1658 ntTSL 515.33■□□□□ 0.045e-9■■■□□ 19.1
LARP4Q71RC2 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.331e-30■■■□□ 19.1
LARP4Q71RC2 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.56□□□□□ -1.365e-12■■■□□ 19.1
LARP4Q71RC2 NPM3-203ENST00000468544 393 ntTSL 59.61□□□□□ -0.873e-7■■■□□ 19.1
LARP4Q71RC2 PHB-206ENST00000504124 796 ntTSL 511.57□□□□□ -0.565e-10■■■□□ 19
LARP4Q71RC2 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.54■□□□□ 0.728e-8■■■□□ 19
LARP4Q71RC2 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.393e-9■■■□□ 19
LARP4Q71RC2 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.27■□□□□ 0.23e-9■■■□□ 19
LARP4Q71RC2 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.26■□□□□ 0.193e-9■■■□□ 19
LARP4Q71RC2 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.37■□□□□ 0.053e-9■■■□□ 19
LARP4Q71RC2 COX5A-205ENST00000568517 582 ntTSL 3 BASIC12.52□□□□□ -0.413e-9■■■□□ 19
LARP4Q71RC2 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.194e-7■■■□□ 19
LARP4Q71RC2 PES1-212ENST00000488719 1732 ntTSL 217.66■□□□□ 0.423e-8■■■□□ 19
LARP4Q71RC2 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.153e-8■■■□□ 19
LARP4Q71RC2 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.71□□□□□ -0.063e-8■■■□□ 19
LARP4Q71RC2 PES1-208ENST00000441668 999 ntTSL 313.66□□□□□ -0.223e-8■■■□□ 19
LARP4Q71RC2 PES1-205ENST00000405677 2708 ntTSL 2 BASIC13.16□□□□□ -0.33e-8■■■□□ 19
LARP4Q71RC2 PES1-203ENST00000402281 2760 ntTSL 2 BASIC12.29□□□□□ -0.443e-8■■■□□ 19
LARP4Q71RC2 ARL2-203ENST00000529254 601 nt13.14□□□□□ -0.311e-10■■■□□ 19
LARP4Q71RC2 MON2-205ENST00000547095 5708 ntTSL 1 (best)15.92■□□□□ 0.142e-6■■■□□ 19
LARP4Q71RC2 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.82■□□□□ 0.122e-6■■■□□ 19
LARP4Q71RC2 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.37■□□□□ 0.052e-6■■■□□ 19
LARP4Q71RC2 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.23■□□□□ 0.032e-6■■■□□ 19
LARP4Q71RC2 MON2-212ENST00000552115 3760 ntTSL 5 BASIC11.98□□□□□ -0.492e-6■■■□□ 19
LARP4Q71RC2 MON2-214ENST00000641654 10382 ntBASIC10.06□□□□□ -0.82e-6■■■□□ 19
LARP4Q71RC2 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.192e-6■■■□□ 19
LARP4Q71RC2 UQCRB-208ENST00000521948 997 ntTSL 28.56□□□□□ -1.041e-6■■■□□ 19
LARP4Q71RC2 UQCRB-206ENST00000519322 750 ntTSL 25.35□□□□□ -1.551e-6■■■□□ 19
LARP4Q71RC2 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.08□□□□□ -1.61e-6■■■□□ 19
LARP4Q71RC2 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.76■□□□□ 0.912e-23■■■□□ 19
LARP4Q71RC2 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.712e-23■■■□□ 19
LARP4Q71RC2 ACADVL-201ENST00000322910 2352 ntTSL 218.28■□□□□ 0.522e-23■■■□□ 19
LARP4Q71RC2 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.77■□□□□ 0.442e-23■■■□□ 19
LARP4Q71RC2 ACADVL-237ENST00000583858 1015 ntTSL 517.28■□□□□ 0.362e-23■■■□□ 19
LARP4Q71RC2 ACADVL-236ENST00000583850 903 ntTSL 217.11■□□□□ 0.332e-23■■■□□ 19
LARP4Q71RC2 ACADVL-209ENST00000578033 562 ntTSL 216.81■□□□□ 0.282e-23■■■□□ 19
LARP4Q71RC2 ACADVL-214ENST00000578711 1732 nt16.07■□□□□ 0.162e-23■■■□□ 19
LARP4Q71RC2 ACADVL-204ENST00000542255 1016 ntTSL 515.37■□□□□ 0.052e-23■■■□□ 19
LARP4Q71RC2 ACADVL-219ENST00000579425 1234 ntTSL 513.66□□□□□ -0.222e-23■■■□□ 19
LARP4Q71RC2 ACADVL-215ENST00000578809 709 ntTSL 212.46□□□□□ -0.412e-23■■■□□ 19
LARP4Q71RC2 ACADVL-211ENST00000578319 718 ntTSL 311.8□□□□□ -0.522e-23■■■□□ 19
LARP4Q71RC2 ACADVL-235ENST00000583848 503 ntTSL 311.24□□□□□ -0.612e-23■■■□□ 19
LARP4Q71RC2 ARL10-204ENST00000514533 258 ntTSL 313.4□□□□□ -0.265e-8■■■□□ 19
LARP4Q71RC2 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.445e-8■■■□□ 19
LARP4Q71RC2 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.86e-7■■■□□ 18.9
LARP4Q71RC2 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.75■■□□□ 1.396e-7■■■□□ 18.9
LARP4Q71RC2 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.275e-7■■■□□ 18.9
LARP4Q71RC2 ERH-201ENST00000216520 668 ntTSL 313.08□□□□□ -0.323e-22■■■□□ 18.9
LARP4Q71RC2 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.353e-22■■■□□ 18.9
LARP4Q71RC2 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.322e-6■■■□□ 18.9
LARP4Q71RC2 S100A13-206ENST00000491177 2184 ntTSL 216.52■□□□□ 0.242e-6■■■□□ 18.9
LARP4Q71RC2 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.462e-6■■■□□ 18.9
LARP4Q71RC2 S100A13-201ENST00000339556 514 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.842e-6■■■□□ 18.9
LARP4Q71RC2 S100A13-205ENST00000476133 710 ntTSL 1 (best)8.97□□□□□ -0.972e-6■■■□□ 18.9
LARP4Q71RC2 S100A13-204ENST00000440685 686 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.052e-6■■■□□ 18.9
LARP4Q71RC2 S100A13-202ENST00000392622 547 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.22e-6■■■□□ 18.9
LARP4Q71RC2 ECH1-212ENST00000600178 1007 ntTSL 215.87■□□□□ 0.134e-6■■■□□ 18.9
Retrieved 100 of 15,922 protein–RNA pairs in 277.3 ms