Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
LCA10Q71F78 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
LCA10Q71F78 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LCA10Q71F78 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LCA10Q71F78 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LCA10Q71F78 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LCA10Q71F78 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC11.28□□□□□ -0.6
LCA10Q71F78 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LCA10Q71F78 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC11.28□□□□□ -0.6
LCA10Q71F78 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LCA10Q71F78 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
LCA10Q71F78 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC11.28□□□□□ -0.6
LCA10Q71F78 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC11.27□□□□□ -0.6
LCA10Q71F78 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
LCA10Q71F78 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
LCA10Q71F78 AL161729.1-201ENST00000604104 1402 ntBASIC11.27□□□□□ -0.6
LCA10Q71F78 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
LCA10Q71F78 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
LCA10Q71F78 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC11.27□□□□□ -0.6
LCA10Q71F78 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
LCA10Q71F78 EI24-213ENST00000618552 1747 ntTSL 5 BASIC11.27□□□□□ -0.61
LCA10Q71F78 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LCA10Q71F78 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LCA10Q71F78 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC11.27□□□□□ -0.61
LCA10Q71F78 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC11.27□□□□□ -0.61
LCA10Q71F78 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LCA10Q71F78 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LCA10Q71F78 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LCA10Q71F78 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LCA10Q71F78 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LCA10Q71F78 AL592295.1-201ENST00000400984 884 ntBASIC11.27□□□□□ -0.61
LCA10Q71F78 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
LCA10Q71F78 SSSCA1-AS1-201ENST00000567594 614 ntBASIC11.27□□□□□ -0.61
LCA10Q71F78 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
LCA10Q71F78 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.61
LCA10Q71F78 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC11.27□□□□□ -0.61
LCA10Q71F78 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LCA10Q71F78 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LCA10Q71F78 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
LCA10Q71F78 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
LCA10Q71F78 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LCA10Q71F78 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
LCA10Q71F78 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LCA10Q71F78 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LCA10Q71F78 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC11.27□□□□□ -0.61
LCA10Q71F78 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
LCA10Q71F78 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC11.27□□□□□ -0.61
LCA10Q71F78 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LCA10Q71F78 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LCA10Q71F78 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC11.27□□□□□ -0.61
LCA10Q71F78 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LCA10Q71F78 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LCA10Q71F78 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LCA10Q71F78 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LCA10Q71F78 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
LCA10Q71F78 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC11.26□□□□□ -0.61
LCA10Q71F78 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LCA10Q71F78 AC092053.2-201ENST00000640557 1818 ntBASIC11.26□□□□□ -0.61
LCA10Q71F78 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LCA10Q71F78 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
LCA10Q71F78 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LCA10Q71F78 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LCA10Q71F78 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
LCA10Q71F78 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LCA10Q71F78 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LCA10Q71F78 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC11.26□□□□□ -0.61
LCA10Q71F78 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LCA10Q71F78 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC11.26□□□□□ -0.61
LCA10Q71F78 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
LCA10Q71F78 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
LCA10Q71F78 AL592293.1-201ENST00000502889 1188 ntBASIC11.26□□□□□ -0.61
LCA10Q71F78 MBP-237ENST00000579129 1052 ntTSL 5 BASIC11.26□□□□□ -0.61
LCA10Q71F78 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LCA10Q71F78 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LCA10Q71F78 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
LCA10Q71F78 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LCA10Q71F78 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC11.26□□□□□ -0.61
LCA10Q71F78 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LCA10Q71F78 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC11.26□□□□□ -0.61
LCA10Q71F78 AC104581.1-202ENST00000635932 2618 ntBASIC11.26□□□□□ -0.61
LCA10Q71F78 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LCA10Q71F78 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LCA10Q71F78 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC11.26□□□□□ -0.61
LCA10Q71F78 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
LCA10Q71F78 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
LCA10Q71F78 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LCA10Q71F78 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LCA10Q71F78 AL133373.2-201ENST00000623187 2828 ntBASIC11.26□□□□□ -0.61
LCA10Q71F78 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
LCA10Q71F78 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LCA10Q71F78 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LCA10Q71F78 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LCA10Q71F78 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LCA10Q71F78 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LCA10Q71F78 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LCA10Q71F78 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
LCA10Q71F78 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
LCA10Q71F78 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LCA10Q71F78 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LCA10Q71F78 AC004408.2-201ENST00000623613 2777 ntBASIC11.25□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms