Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PTCHD4Q6ZW05 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTCHD4Q6ZW05 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTCHD4Q6ZW05 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PTCHD4Q6ZW05 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PTCHD4Q6ZW05 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PTCHD4Q6ZW05 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTCHD4Q6ZW05 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
PTCHD4Q6ZW05 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTCHD4Q6ZW05 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTCHD4Q6ZW05 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTCHD4Q6ZW05 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTCHD4Q6ZW05 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PTCHD4Q6ZW05 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.27■□□□□ 0.68
PTCHD4Q6ZW05 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTCHD4Q6ZW05 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTCHD4Q6ZW05 SERBP1P1-201ENST00000396021 1160 ntBASIC19.27■□□□□ 0.68
PTCHD4Q6ZW05 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.27■□□□□ 0.68
PTCHD4Q6ZW05 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.27■□□□□ 0.67
PTCHD4Q6ZW05 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.27■□□□□ 0.67
PTCHD4Q6ZW05 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PTCHD4Q6ZW05 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.27■□□□□ 0.67
PTCHD4Q6ZW05 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.27■□□□□ 0.67
PTCHD4Q6ZW05 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.27■□□□□ 0.67
PTCHD4Q6ZW05 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
PTCHD4Q6ZW05 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.27■□□□□ 0.67
PTCHD4Q6ZW05 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PTCHD4Q6ZW05 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTCHD4Q6ZW05 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTCHD4Q6ZW05 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PTCHD4Q6ZW05 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PTCHD4Q6ZW05 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PTCHD4Q6ZW05 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.26■□□□□ 0.67
PTCHD4Q6ZW05 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTCHD4Q6ZW05 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PTCHD4Q6ZW05 AC068587.7-201ENST00000641602 218 ntBASIC19.26■□□□□ 0.67
PTCHD4Q6ZW05 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PTCHD4Q6ZW05 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTCHD4Q6ZW05 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTCHD4Q6ZW05 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTCHD4Q6ZW05 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PTCHD4Q6ZW05 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTCHD4Q6ZW05 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTCHD4Q6ZW05 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PTCHD4Q6ZW05 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTCHD4Q6ZW05 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTCHD4Q6ZW05 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PTCHD4Q6ZW05 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PTCHD4Q6ZW05 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PTCHD4Q6ZW05 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTCHD4Q6ZW05 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PTCHD4Q6ZW05 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PTCHD4Q6ZW05 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTCHD4Q6ZW05 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.25■□□□□ 0.67
PTCHD4Q6ZW05 AC131281.2-201ENST00000520478 145 ntBASIC19.25■□□□□ 0.67
PTCHD4Q6ZW05 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTCHD4Q6ZW05 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTCHD4Q6ZW05 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTCHD4Q6ZW05 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTCHD4Q6ZW05 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.25■□□□□ 0.67
PTCHD4Q6ZW05 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PTCHD4Q6ZW05 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTCHD4Q6ZW05 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.24■□□□□ 0.67
PTCHD4Q6ZW05 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
PTCHD4Q6ZW05 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
PTCHD4Q6ZW05 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.24■□□□□ 0.67
PTCHD4Q6ZW05 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
PTCHD4Q6ZW05 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PTCHD4Q6ZW05 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
PTCHD4Q6ZW05 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTCHD4Q6ZW05 SYT6-210ENST00000641643 1587 ntBASIC19.24■□□□□ 0.67
PTCHD4Q6ZW05 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.24■□□□□ 0.67
PTCHD4Q6ZW05 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTCHD4Q6ZW05 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.24■□□□□ 0.67
PTCHD4Q6ZW05 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTCHD4Q6ZW05 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.24■□□□□ 0.67
PTCHD4Q6ZW05 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PTCHD4Q6ZW05 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PTCHD4Q6ZW05 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.24■□□□□ 0.67
PTCHD4Q6ZW05 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.24■□□□□ 0.67
PTCHD4Q6ZW05 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PTCHD4Q6ZW05 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PTCHD4Q6ZW05 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.24■□□□□ 0.67
PTCHD4Q6ZW05 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
PTCHD4Q6ZW05 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTCHD4Q6ZW05 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PTCHD4Q6ZW05 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTCHD4Q6ZW05 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTCHD4Q6ZW05 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
PTCHD4Q6ZW05 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTCHD4Q6ZW05 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.23■□□□□ 0.67
PTCHD4Q6ZW05 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PTCHD4Q6ZW05 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PTCHD4Q6ZW05 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTCHD4Q6ZW05 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTCHD4Q6ZW05 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.23■□□□□ 0.67
PTCHD4Q6ZW05 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.23■□□□□ 0.67
PTCHD4Q6ZW05 AC010141.3-201ENST00000456659 717 ntBASIC19.23■□□□□ 0.67
PTCHD4Q6ZW05 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.23■□□□□ 0.67
PTCHD4Q6ZW05 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms