Protein–RNA interactions for Protein: Q6UXN2

TREML4, Trem-like transcript 4 protein, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREML4Q6UXN2 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TREML4Q6UXN2 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TREML4Q6UXN2 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TREML4Q6UXN2 AC105233.4-201ENST00000642045 216 ntBASIC17.15■□□□□ 0.34
TREML4Q6UXN2 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.15■□□□□ 0.34
TREML4Q6UXN2 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TREML4Q6UXN2 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.15■□□□□ 0.34
TREML4Q6UXN2 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TREML4Q6UXN2 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TREML4Q6UXN2 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TREML4Q6UXN2 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TREML4Q6UXN2 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.15■□□□□ 0.34
TREML4Q6UXN2 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TREML4Q6UXN2 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
TREML4Q6UXN2 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TREML4Q6UXN2 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TREML4Q6UXN2 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
TREML4Q6UXN2 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TREML4Q6UXN2 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TREML4Q6UXN2 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TREML4Q6UXN2 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TREML4Q6UXN2 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.14■□□□□ 0.33
TREML4Q6UXN2 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC17.14■□□□□ 0.33
TREML4Q6UXN2 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.14■□□□□ 0.33
TREML4Q6UXN2 KRT18P61-201ENST00000585825 1298 ntBASIC17.14■□□□□ 0.33
TREML4Q6UXN2 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.14■□□□□ 0.33
TREML4Q6UXN2 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.14■□□□□ 0.33
TREML4Q6UXN2 Z98882.1-201ENST00000622160 2253 ntBASIC17.14■□□□□ 0.33
TREML4Q6UXN2 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.14■□□□□ 0.33
TREML4Q6UXN2 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.14■□□□□ 0.33
TREML4Q6UXN2 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TREML4Q6UXN2 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TREML4Q6UXN2 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TREML4Q6UXN2 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.14■□□□□ 0.33
TREML4Q6UXN2 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
TREML4Q6UXN2 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TREML4Q6UXN2 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TREML4Q6UXN2 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TREML4Q6UXN2 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TREML4Q6UXN2 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.13■□□□□ 0.33
TREML4Q6UXN2 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.13■□□□□ 0.33
TREML4Q6UXN2 AC133637.1-201ENST00000624115 1537 ntBASIC17.13■□□□□ 0.33
TREML4Q6UXN2 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.13■□□□□ 0.33
TREML4Q6UXN2 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC17.13■□□□□ 0.33
TREML4Q6UXN2 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.13■□□□□ 0.33
TREML4Q6UXN2 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TREML4Q6UXN2 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TREML4Q6UXN2 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.13■□□□□ 0.33
TREML4Q6UXN2 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TREML4Q6UXN2 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.13■□□□□ 0.33
TREML4Q6UXN2 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TREML4Q6UXN2 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.13■□□□□ 0.33
TREML4Q6UXN2 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TREML4Q6UXN2 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TREML4Q6UXN2 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TREML4Q6UXN2 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.13■□□□□ 0.33
TREML4Q6UXN2 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
TREML4Q6UXN2 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TREML4Q6UXN2 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC17.13■□□□□ 0.33
TREML4Q6UXN2 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TREML4Q6UXN2 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TREML4Q6UXN2 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TREML4Q6UXN2 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TREML4Q6UXN2 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TREML4Q6UXN2 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TREML4Q6UXN2 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TREML4Q6UXN2 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TREML4Q6UXN2 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TREML4Q6UXN2 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TREML4Q6UXN2 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.12■□□□□ 0.33
TREML4Q6UXN2 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TREML4Q6UXN2 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.12■□□□□ 0.33
TREML4Q6UXN2 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.12■□□□□ 0.33
TREML4Q6UXN2 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
TREML4Q6UXN2 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
TREML4Q6UXN2 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TREML4Q6UXN2 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TREML4Q6UXN2 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TREML4Q6UXN2 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.12■□□□□ 0.33
TREML4Q6UXN2 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TREML4Q6UXN2 AC073130.3-201ENST00000624389 2278 ntBASIC17.12■□□□□ 0.33
TREML4Q6UXN2 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TREML4Q6UXN2 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TREML4Q6UXN2 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.12■□□□□ 0.33
TREML4Q6UXN2 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TREML4Q6UXN2 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TREML4Q6UXN2 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC17.11■□□□□ 0.33
TREML4Q6UXN2 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TREML4Q6UXN2 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TREML4Q6UXN2 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TREML4Q6UXN2 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TREML4Q6UXN2 MIR663A-201ENST00000385250 93 ntBASIC17.11■□□□□ 0.33
TREML4Q6UXN2 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.11■□□□□ 0.33
TREML4Q6UXN2 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.11■□□□□ 0.33
TREML4Q6UXN2 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TREML4Q6UXN2 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TREML4Q6UXN2 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC17.11■□□□□ 0.33
TREML4Q6UXN2 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.1■□□□□ 0.33
TREML4Q6UXN2 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TREML4Q6UXN2 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms