Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.18■□□□□ 0.5
C11orf88Q6PI97 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
C11orf88Q6PI97 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
C11orf88Q6PI97 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
C11orf88Q6PI97 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
C11orf88Q6PI97 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
C11orf88Q6PI97 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
C11orf88Q6PI97 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
C11orf88Q6PI97 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
C11orf88Q6PI97 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
C11orf88Q6PI97 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
C11orf88Q6PI97 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
C11orf88Q6PI97 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.18■□□□□ 0.5
C11orf88Q6PI97 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.18■□□□□ 0.5
C11orf88Q6PI97 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
C11orf88Q6PI97 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
C11orf88Q6PI97 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
C11orf88Q6PI97 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
C11orf88Q6PI97 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
C11orf88Q6PI97 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
C11orf88Q6PI97 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
C11orf88Q6PI97 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
C11orf88Q6PI97 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
C11orf88Q6PI97 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.17■□□□□ 0.5
C11orf88Q6PI97 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
C11orf88Q6PI97 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
C11orf88Q6PI97 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.17■□□□□ 0.5
C11orf88Q6PI97 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.17■□□□□ 0.5
C11orf88Q6PI97 MIR935-201ENST00000401179 91 ntBASIC18.17■□□□□ 0.5
C11orf88Q6PI97 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.17■□□□□ 0.5
C11orf88Q6PI97 DUX4L19-201ENST00000557448 1267 ntBASIC18.17■□□□□ 0.5
C11orf88Q6PI97 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.17■□□□□ 0.5
C11orf88Q6PI97 AC092171.4-201ENST00000609130 632 ntBASIC18.17■□□□□ 0.5
C11orf88Q6PI97 AC005837.3-201ENST00000612163 286 ntBASIC18.17■□□□□ 0.5
C11orf88Q6PI97 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
C11orf88Q6PI97 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
C11orf88Q6PI97 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
C11orf88Q6PI97 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
C11orf88Q6PI97 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
C11orf88Q6PI97 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
C11orf88Q6PI97 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.17■□□□□ 0.5
C11orf88Q6PI97 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
C11orf88Q6PI97 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
C11orf88Q6PI97 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
C11orf88Q6PI97 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
C11orf88Q6PI97 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.16■□□□□ 0.5
C11orf88Q6PI97 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
C11orf88Q6PI97 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
C11orf88Q6PI97 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
C11orf88Q6PI97 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
C11orf88Q6PI97 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
C11orf88Q6PI97 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
C11orf88Q6PI97 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
C11orf88Q6PI97 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
C11orf88Q6PI97 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
C11orf88Q6PI97 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.16■□□□□ 0.5
C11orf88Q6PI97 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
C11orf88Q6PI97 LINC01006-201ENST00000333319 2292 ntBASIC18.16■□□□□ 0.5
C11orf88Q6PI97 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
C11orf88Q6PI97 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.16■□□□□ 0.5
C11orf88Q6PI97 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
C11orf88Q6PI97 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
C11orf88Q6PI97 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
C11orf88Q6PI97 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
C11orf88Q6PI97 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
C11orf88Q6PI97 FEM1AP4-201ENST00000443167 1987 ntBASIC18.15■□□□□ 0.5
C11orf88Q6PI97 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
C11orf88Q6PI97 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
C11orf88Q6PI97 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.15■□□□□ 0.5
C11orf88Q6PI97 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
C11orf88Q6PI97 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
C11orf88Q6PI97 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
C11orf88Q6PI97 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.15■□□□□ 0.5
C11orf88Q6PI97 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.15■□□□□ 0.5
C11orf88Q6PI97 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
C11orf88Q6PI97 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
C11orf88Q6PI97 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
C11orf88Q6PI97 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
C11orf88Q6PI97 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.15■□□□□ 0.5
C11orf88Q6PI97 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.15■□□□□ 0.5
C11orf88Q6PI97 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
C11orf88Q6PI97 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
C11orf88Q6PI97 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.14■□□□□ 0.5
C11orf88Q6PI97 AL391422.3-201ENST00000603791 2761 ntBASIC18.14■□□□□ 0.5
C11orf88Q6PI97 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
C11orf88Q6PI97 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
C11orf88Q6PI97 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
C11orf88Q6PI97 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
C11orf88Q6PI97 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.14■□□□□ 0.49
C11orf88Q6PI97 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.14■□□□□ 0.49
C11orf88Q6PI97 AC106739.1-201ENST00000617035 715 ntBASIC18.14■□□□□ 0.49
C11orf88Q6PI97 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
C11orf88Q6PI97 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
C11orf88Q6PI97 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
C11orf88Q6PI97 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
C11orf88Q6PI97 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
C11orf88Q6PI97 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
C11orf88Q6PI97 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
C11orf88Q6PI97 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
C11orf88Q6PI97 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms