Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.09■□□□□ 0.65
NIPAL3Q6P499 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
NIPAL3Q6P499 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NIPAL3Q6P499 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NIPAL3Q6P499 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
NIPAL3Q6P499 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.09■□□□□ 0.65
NIPAL3Q6P499 AL358852.1-201ENST00000623174 1268 ntBASIC19.09■□□□□ 0.65
NIPAL3Q6P499 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NIPAL3Q6P499 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NIPAL3Q6P499 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NIPAL3Q6P499 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.09■□□□□ 0.65
NIPAL3Q6P499 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NIPAL3Q6P499 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
NIPAL3Q6P499 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
NIPAL3Q6P499 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NIPAL3Q6P499 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NIPAL3Q6P499 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NIPAL3Q6P499 LINC01521-201ENST00000504184 1943 ntBASIC19.08■□□□□ 0.65
NIPAL3Q6P499 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.08■□□□□ 0.65
NIPAL3Q6P499 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.08■□□□□ 0.65
NIPAL3Q6P499 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
NIPAL3Q6P499 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NIPAL3Q6P499 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NIPAL3Q6P499 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.08■□□□□ 0.64
NIPAL3Q6P499 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
NIPAL3Q6P499 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NIPAL3Q6P499 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.08■□□□□ 0.64
NIPAL3Q6P499 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.08■□□□□ 0.64
NIPAL3Q6P499 MIR6084-201ENST00000622012 110 ntBASIC19.08■□□□□ 0.64
NIPAL3Q6P499 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NIPAL3Q6P499 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NIPAL3Q6P499 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.08■□□□□ 0.64
NIPAL3Q6P499 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.08■□□□□ 0.64
NIPAL3Q6P499 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NIPAL3Q6P499 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.08■□□□□ 0.64
NIPAL3Q6P499 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
NIPAL3Q6P499 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NIPAL3Q6P499 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NIPAL3Q6P499 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NIPAL3Q6P499 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
NIPAL3Q6P499 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NIPAL3Q6P499 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NIPAL3Q6P499 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NIPAL3Q6P499 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NIPAL3Q6P499 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NIPAL3Q6P499 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NIPAL3Q6P499 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NIPAL3Q6P499 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
NIPAL3Q6P499 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NIPAL3Q6P499 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
NIPAL3Q6P499 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NIPAL3Q6P499 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.07■□□□□ 0.64
NIPAL3Q6P499 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NIPAL3Q6P499 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NIPAL3Q6P499 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.07■□□□□ 0.64
NIPAL3Q6P499 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.07■□□□□ 0.64
NIPAL3Q6P499 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
NIPAL3Q6P499 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
NIPAL3Q6P499 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NIPAL3Q6P499 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NIPAL3Q6P499 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NIPAL3Q6P499 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NIPAL3Q6P499 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NIPAL3Q6P499 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NIPAL3Q6P499 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NIPAL3Q6P499 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.06■□□□□ 0.64
NIPAL3Q6P499 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
NIPAL3Q6P499 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
NIPAL3Q6P499 AC019069.1-201ENST00000610008 1333 ntBASIC19.06■□□□□ 0.64
NIPAL3Q6P499 BX005040.4-201ENST00000637145 1518 ntBASIC19.06■□□□□ 0.64
NIPAL3Q6P499 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NIPAL3Q6P499 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
NIPAL3Q6P499 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NIPAL3Q6P499 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.06■□□□□ 0.64
NIPAL3Q6P499 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
NIPAL3Q6P499 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NIPAL3Q6P499 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.06■□□□□ 0.64
NIPAL3Q6P499 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.06■□□□□ 0.64
NIPAL3Q6P499 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NIPAL3Q6P499 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NIPAL3Q6P499 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NIPAL3Q6P499 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NIPAL3Q6P499 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.06■□□□□ 0.64
NIPAL3Q6P499 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NIPAL3Q6P499 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.05■□□□□ 0.64
NIPAL3Q6P499 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NIPAL3Q6P499 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
NIPAL3Q6P499 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NIPAL3Q6P499 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NIPAL3Q6P499 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
NIPAL3Q6P499 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NIPAL3Q6P499 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NIPAL3Q6P499 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.05■□□□□ 0.64
NIPAL3Q6P499 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NIPAL3Q6P499 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NIPAL3Q6P499 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
NIPAL3Q6P499 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NIPAL3Q6P499 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
NIPAL3Q6P499 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NIPAL3Q6P499 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms