Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
FAM78BQ5VT40 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC16.6■□□□□ 0.25
FAM78BQ5VT40 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
FAM78BQ5VT40 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC16.6■□□□□ 0.25
FAM78BQ5VT40 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC16.6■□□□□ 0.25
FAM78BQ5VT40 AL031602.1-201ENST00000633169 911 ntBASIC16.6■□□□□ 0.25
FAM78BQ5VT40 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
FAM78BQ5VT40 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC16.6■□□□□ 0.25
FAM78BQ5VT40 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FAM78BQ5VT40 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
FAM78BQ5VT40 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
FAM78BQ5VT40 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FAM78BQ5VT40 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FAM78BQ5VT40 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC16.6■□□□□ 0.25
FAM78BQ5VT40 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC16.6■□□□□ 0.25
FAM78BQ5VT40 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC16.6■□□□□ 0.25
FAM78BQ5VT40 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
FAM78BQ5VT40 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
FAM78BQ5VT40 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC16.6■□□□□ 0.25
FAM78BQ5VT40 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FAM78BQ5VT40 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC16.6■□□□□ 0.25
FAM78BQ5VT40 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
FAM78BQ5VT40 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FAM78BQ5VT40 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC16.59■□□□□ 0.25
FAM78BQ5VT40 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
FAM78BQ5VT40 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.59■□□□□ 0.25
FAM78BQ5VT40 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FAM78BQ5VT40 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
FAM78BQ5VT40 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC16.59■□□□□ 0.25
FAM78BQ5VT40 KRT16P3-201ENST00000439127 1283 ntBASIC16.59■□□□□ 0.25
FAM78BQ5VT40 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
FAM78BQ5VT40 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC16.59■□□□□ 0.25
FAM78BQ5VT40 TRIR-205ENST00000592273 783 ntTSL 3 BASIC16.59■□□□□ 0.25
FAM78BQ5VT40 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC16.59■□□□□ 0.25
FAM78BQ5VT40 MIR6724-1-201ENST00000616420 92 ntBASIC16.59■□□□□ 0.25
FAM78BQ5VT40 MIR6724-2-201ENST00000616483 92 ntBASIC16.59■□□□□ 0.25
FAM78BQ5VT40 MIR6724-4-201ENST00000617390 92 ntBASIC16.59■□□□□ 0.25
FAM78BQ5VT40 MIR6724-3-201ENST00000622482 92 ntBASIC16.59■□□□□ 0.25
FAM78BQ5VT40 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FAM78BQ5VT40 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FAM78BQ5VT40 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.59■□□□□ 0.25
FAM78BQ5VT40 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
FAM78BQ5VT40 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
FAM78BQ5VT40 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
FAM78BQ5VT40 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FAM78BQ5VT40 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
FAM78BQ5VT40 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FAM78BQ5VT40 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
FAM78BQ5VT40 FEM1AP1-201ENST00000431297 1995 ntBASIC16.58■□□□□ 0.25
FAM78BQ5VT40 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
FAM78BQ5VT40 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
FAM78BQ5VT40 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
FAM78BQ5VT40 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
FAM78BQ5VT40 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
FAM78BQ5VT40 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.24
FAM78BQ5VT40 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.24
FAM78BQ5VT40 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
FAM78BQ5VT40 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC16.58■□□□□ 0.24
FAM78BQ5VT40 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
FAM78BQ5VT40 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
FAM78BQ5VT40 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
FAM78BQ5VT40 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FAM78BQ5VT40 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FAM78BQ5VT40 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FAM78BQ5VT40 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
FAM78BQ5VT40 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
FAM78BQ5VT40 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC16.57■□□□□ 0.24
FAM78BQ5VT40 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
FAM78BQ5VT40 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
FAM78BQ5VT40 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
FAM78BQ5VT40 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC16.57■□□□□ 0.24
FAM78BQ5VT40 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FAM78BQ5VT40 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FAM78BQ5VT40 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
FAM78BQ5VT40 GUSBP5-201ENST00000418136 578 ntBASIC16.57■□□□□ 0.24
FAM78BQ5VT40 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FAM78BQ5VT40 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
FAM78BQ5VT40 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FAM78BQ5VT40 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FAM78BQ5VT40 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FAM78BQ5VT40 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC16.57■□□□□ 0.24
FAM78BQ5VT40 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FAM78BQ5VT40 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
FAM78BQ5VT40 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FAM78BQ5VT40 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
FAM78BQ5VT40 AL049796.1-201ENST00000565336 1766 ntBASIC16.56■□□□□ 0.24
FAM78BQ5VT40 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC16.56■□□□□ 0.24
FAM78BQ5VT40 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
FAM78BQ5VT40 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
FAM78BQ5VT40 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
FAM78BQ5VT40 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
FAM78BQ5VT40 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC16.56■□□□□ 0.24
FAM78BQ5VT40 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC16.56■□□□□ 0.24
FAM78BQ5VT40 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC16.56■□□□□ 0.24
FAM78BQ5VT40 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC16.56■□□□□ 0.24
FAM78BQ5VT40 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC16.56■□□□□ 0.24
FAM78BQ5VT40 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.56■□□□□ 0.24
FAM78BQ5VT40 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
FAM78BQ5VT40 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC16.56■□□□□ 0.24
FAM78BQ5VT40 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms