Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RSPO1Q2MKA7 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RSPO1Q2MKA7 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RSPO1Q2MKA7 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RSPO1Q2MKA7 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RSPO1Q2MKA7 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RSPO1Q2MKA7 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RSPO1Q2MKA7 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RSPO1Q2MKA7 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.24■□□□□ 0.51
RSPO1Q2MKA7 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.24■□□□□ 0.51
RSPO1Q2MKA7 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RSPO1Q2MKA7 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.24■□□□□ 0.51
RSPO1Q2MKA7 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
RSPO1Q2MKA7 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RSPO1Q2MKA7 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RSPO1Q2MKA7 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RSPO1Q2MKA7 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
RSPO1Q2MKA7 KRT87P-202ENST00000534226 1464 ntBASIC18.23■□□□□ 0.51
RSPO1Q2MKA7 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RSPO1Q2MKA7 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.23■□□□□ 0.51
RSPO1Q2MKA7 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.23■□□□□ 0.51
RSPO1Q2MKA7 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.23■□□□□ 0.51
RSPO1Q2MKA7 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RSPO1Q2MKA7 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.23■□□□□ 0.51
RSPO1Q2MKA7 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RSPO1Q2MKA7 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RSPO1Q2MKA7 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RSPO1Q2MKA7 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.22■□□□□ 0.51
RSPO1Q2MKA7 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.22■□□□□ 0.51
RSPO1Q2MKA7 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RSPO1Q2MKA7 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
RSPO1Q2MKA7 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RSPO1Q2MKA7 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RSPO1Q2MKA7 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
RSPO1Q2MKA7 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.22■□□□□ 0.51
RSPO1Q2MKA7 CCDC92B-201ENST00000575506 885 ntBASIC18.22■□□□□ 0.51
RSPO1Q2MKA7 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.22■□□□□ 0.51
RSPO1Q2MKA7 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RSPO1Q2MKA7 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
RSPO1Q2MKA7 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
RSPO1Q2MKA7 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.22■□□□□ 0.51
RSPO1Q2MKA7 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
RSPO1Q2MKA7 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.22■□□□□ 0.51
RSPO1Q2MKA7 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.22■□□□□ 0.51
RSPO1Q2MKA7 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.22■□□□□ 0.51
RSPO1Q2MKA7 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RSPO1Q2MKA7 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RSPO1Q2MKA7 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.21■□□□□ 0.51
RSPO1Q2MKA7 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
RSPO1Q2MKA7 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.21■□□□□ 0.51
RSPO1Q2MKA7 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RSPO1Q2MKA7 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RSPO1Q2MKA7 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RSPO1Q2MKA7 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RSPO1Q2MKA7 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.21■□□□□ 0.51
RSPO1Q2MKA7 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.21■□□□□ 0.51
RSPO1Q2MKA7 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.21■□□□□ 0.51
RSPO1Q2MKA7 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.21■□□□□ 0.51
RSPO1Q2MKA7 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RSPO1Q2MKA7 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RSPO1Q2MKA7 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
RSPO1Q2MKA7 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RSPO1Q2MKA7 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
RSPO1Q2MKA7 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RSPO1Q2MKA7 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RSPO1Q2MKA7 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RSPO1Q2MKA7 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RSPO1Q2MKA7 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RSPO1Q2MKA7 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RSPO1Q2MKA7 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.2■□□□□ 0.5
RSPO1Q2MKA7 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.2■□□□□ 0.5
RSPO1Q2MKA7 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RSPO1Q2MKA7 AC138907.5-202ENST00000569484 235 ntBASIC18.2■□□□□ 0.5
RSPO1Q2MKA7 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RSPO1Q2MKA7 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.2■□□□□ 0.5
RSPO1Q2MKA7 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RSPO1Q2MKA7 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
RSPO1Q2MKA7 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RSPO1Q2MKA7 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.2■□□□□ 0.5
RSPO1Q2MKA7 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RSPO1Q2MKA7 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RSPO1Q2MKA7 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
RSPO1Q2MKA7 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
RSPO1Q2MKA7 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.19■□□□□ 0.5
RSPO1Q2MKA7 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
RSPO1Q2MKA7 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.19■□□□□ 0.5
RSPO1Q2MKA7 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.19■□□□□ 0.5
RSPO1Q2MKA7 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.19■□□□□ 0.5
RSPO1Q2MKA7 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RSPO1Q2MKA7 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RSPO1Q2MKA7 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RSPO1Q2MKA7 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
RSPO1Q2MKA7 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RSPO1Q2MKA7 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RSPO1Q2MKA7 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
RSPO1Q2MKA7 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.19■□□□□ 0.5
RSPO1Q2MKA7 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RSPO1Q2MKA7 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RSPO1Q2MKA7 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.19■□□□□ 0.5
RSPO1Q2MKA7 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms