Protein–RNA interactions for Protein: Q00653

NFKB2, Nuclear factor NF-kappa-B p100 subunit, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB2Q00653 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NFKB2Q00653 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.79■□□□□ 0.92
NFKB2Q00653 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
NFKB2Q00653 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NFKB2Q00653 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.79■□□□□ 0.92
NFKB2Q00653 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NFKB2Q00653 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NFKB2Q00653 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NFKB2Q00653 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NFKB2Q00653 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.78■□□□□ 0.92
NFKB2Q00653 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.78■□□□□ 0.92
NFKB2Q00653 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.78■□□□□ 0.92
NFKB2Q00653 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.78■□□□□ 0.92
NFKB2Q00653 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.78■□□□□ 0.92
NFKB2Q00653 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NFKB2Q00653 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.78■□□□□ 0.92
NFKB2Q00653 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.78■□□□□ 0.92
NFKB2Q00653 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
NFKB2Q00653 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
NFKB2Q00653 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NFKB2Q00653 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NFKB2Q00653 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NFKB2Q00653 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
NFKB2Q00653 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NFKB2Q00653 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
NFKB2Q00653 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NFKB2Q00653 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
NFKB2Q00653 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NFKB2Q00653 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NFKB2Q00653 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NFKB2Q00653 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NFKB2Q00653 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NFKB2Q00653 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
NFKB2Q00653 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NFKB2Q00653 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NFKB2Q00653 KRT18P14-201ENST00000534205 1250 ntBASIC20.77■□□□□ 0.92
NFKB2Q00653 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.77■□□□□ 0.92
NFKB2Q00653 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.77■□□□□ 0.92
NFKB2Q00653 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.77■□□□□ 0.92
NFKB2Q00653 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.77■□□□□ 0.92
NFKB2Q00653 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NFKB2Q00653 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NFKB2Q00653 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
NFKB2Q00653 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
NFKB2Q00653 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
NFKB2Q00653 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NFKB2Q00653 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
NFKB2Q00653 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.76■□□□□ 0.91
NFKB2Q00653 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NFKB2Q00653 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NFKB2Q00653 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NFKB2Q00653 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NFKB2Q00653 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.76■□□□□ 0.91
NFKB2Q00653 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.76■□□□□ 0.91
NFKB2Q00653 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
NFKB2Q00653 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NFKB2Q00653 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.76■□□□□ 0.91
NFKB2Q00653 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NFKB2Q00653 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.76■□□□□ 0.91
NFKB2Q00653 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.76■□□□□ 0.91
NFKB2Q00653 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NFKB2Q00653 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
NFKB2Q00653 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.76■□□□□ 0.91
NFKB2Q00653 AL354811.1-201ENST00000610286 706 ntBASIC20.76■□□□□ 0.91
NFKB2Q00653 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NFKB2Q00653 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NFKB2Q00653 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NFKB2Q00653 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.76■□□□□ 0.91
NFKB2Q00653 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.76■□□□□ 0.91
NFKB2Q00653 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
NFKB2Q00653 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NFKB2Q00653 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NFKB2Q00653 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NFKB2Q00653 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NFKB2Q00653 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NFKB2Q00653 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NFKB2Q00653 AC080038.1-201ENST00000611274 1154 ntBASIC20.75■□□□□ 0.91
NFKB2Q00653 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NFKB2Q00653 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NFKB2Q00653 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
NFKB2Q00653 AL049796.1-201ENST00000565336 1766 ntBASIC20.74■□□□□ 0.91
NFKB2Q00653 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NFKB2Q00653 PKD1P6-201ENST00000343738 4769 ntBASIC20.74■□□□□ 0.91
NFKB2Q00653 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.74■□□□□ 0.91
NFKB2Q00653 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.74■□□□□ 0.91
NFKB2Q00653 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NFKB2Q00653 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
NFKB2Q00653 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.74■□□□□ 0.91
NFKB2Q00653 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
NFKB2Q00653 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.74■□□□□ 0.91
NFKB2Q00653 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
NFKB2Q00653 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NFKB2Q00653 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.74■□□□□ 0.91
NFKB2Q00653 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.74■□□□□ 0.91
NFKB2Q00653 SMUG1P1-201ENST00000590640 811 ntBASIC20.74■□□□□ 0.91
NFKB2Q00653 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NFKB2Q00653 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.74■□□□□ 0.91
NFKB2Q00653 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NFKB2Q00653 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
NFKB2Q00653 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms