Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HIST1H3AP68431 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
HIST1H3AP68431 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIST1H3AP68431 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIST1H3AP68431 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
HIST1H3AP68431 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.37■□□□□ 0.53
HIST1H3AP68431 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.37■□□□□ 0.53
HIST1H3AP68431 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
HIST1H3AP68431 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIST1H3AP68431 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
HIST1H3AP68431 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIST1H3AP68431 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.37■□□□□ 0.53
HIST1H3AP68431 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIST1H3AP68431 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.37■□□□□ 0.53
HIST1H3AP68431 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIST1H3AP68431 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.37■□□□□ 0.53
HIST1H3AP68431 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
HIST1H3AP68431 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HIST1H3AP68431 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HIST1H3AP68431 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HIST1H3AP68431 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HIST1H3AP68431 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.36■□□□□ 0.53
HIST1H3AP68431 AC079140.4-201ENST00000507448 529 ntBASIC18.36■□□□□ 0.53
HIST1H3AP68431 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.36■□□□□ 0.53
HIST1H3AP68431 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.36■□□□□ 0.53
HIST1H3AP68431 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HIST1H3AP68431 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.36■□□□□ 0.53
HIST1H3AP68431 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.36■□□□□ 0.53
HIST1H3AP68431 LINC02228-203ENST00000641970 1355 ntBASIC18.36■□□□□ 0.53
HIST1H3AP68431 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.36■□□□□ 0.53
HIST1H3AP68431 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HIST1H3AP68431 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
HIST1H3AP68431 KRT87P-202ENST00000534226 1464 ntBASIC18.35■□□□□ 0.53
HIST1H3AP68431 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HIST1H3AP68431 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HIST1H3AP68431 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.35■□□□□ 0.53
HIST1H3AP68431 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.35■□□□□ 0.53
HIST1H3AP68431 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.35■□□□□ 0.53
HIST1H3AP68431 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.35■□□□□ 0.53
HIST1H3AP68431 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HIST1H3AP68431 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HIST1H3AP68431 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
HIST1H3AP68431 PKD1P6-201ENST00000343738 4769 ntBASIC18.35■□□□□ 0.53
HIST1H3AP68431 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
HIST1H3AP68431 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HIST1H3AP68431 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.34■□□□□ 0.53
HIST1H3AP68431 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.34■□□□□ 0.53
HIST1H3AP68431 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
HIST1H3AP68431 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HIST1H3AP68431 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.34■□□□□ 0.53
HIST1H3AP68431 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.34■□□□□ 0.53
HIST1H3AP68431 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
HIST1H3AP68431 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
HIST1H3AP68431 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HIST1H3AP68431 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.34■□□□□ 0.53
HIST1H3AP68431 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
HIST1H3AP68431 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HIST1H3AP68431 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HIST1H3AP68431 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
HIST1H3AP68431 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HIST1H3AP68431 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HIST1H3AP68431 ZNRF2P3-201ENST00000424200 374 ntBASIC18.33■□□□□ 0.52
HIST1H3AP68431 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HIST1H3AP68431 YBX1P1-201ENST00000445822 960 ntBASIC18.33■□□□□ 0.52
HIST1H3AP68431 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
HIST1H3AP68431 TERF1P2-201ENST00000583350 1212 ntBASIC18.33■□□□□ 0.52
HIST1H3AP68431 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HIST1H3AP68431 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HIST1H3AP68431 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
HIST1H3AP68431 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
HIST1H3AP68431 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HIST1H3AP68431 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.32■□□□□ 0.52
HIST1H3AP68431 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HIST1H3AP68431 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HIST1H3AP68431 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HIST1H3AP68431 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
HIST1H3AP68431 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HIST1H3AP68431 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
HIST1H3AP68431 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.32■□□□□ 0.52
HIST1H3AP68431 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HIST1H3AP68431 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HIST1H3AP68431 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HIST1H3AP68431 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
HIST1H3AP68431 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HIST1H3AP68431 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.32■□□□□ 0.52
HIST1H3AP68431 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HIST1H3AP68431 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
HIST1H3AP68431 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HIST1H3AP68431 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
HIST1H3AP68431 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.31■□□□□ 0.52
HIST1H3AP68431 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.31■□□□□ 0.52
HIST1H3AP68431 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HIST1H3AP68431 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HIST1H3AP68431 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HIST1H3AP68431 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.31■□□□□ 0.52
HIST1H3AP68431 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.31■□□□□ 0.52
HIST1H3AP68431 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HIST1H3AP68431 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HIST1H3AP68431 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HIST1H3AP68431 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms